Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00385 and RBAM_002640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00385.1.9828.seq
# -bsequence dna-align/RBAM_002640___ybfE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00385-RBAM_002640___ybfE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00385-RBAM_002640___ybfE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00385
# 2: RBAM_002640___ybfE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity: 116/331 (35.0%)
# Similarity: 116/331 (35.0%)
# Gaps: 170/331 (51.4%)
# Score: 380.0
#
#
#=======================================
BSNT_00385 0 -------------------------------------------------- 0
RBAM_002640__ 1 ATGAAACAAGATTCGCTCACACTGAATCAAATGAAAATGTGTTTCACTGA 50
BSNT_00385 0 -------------------------------------------------- 0
RBAM_002640__ 51 ACCGCCCCTCACCTTCCAACATACTGTCAAAATCGTATGTACAGTTACAT 100
BSNT_00385 0 -------------------------------------------------- 0
RBAM_002640__ 101 TCATCACGTTATATATCTTTTTTTTCAGCACTCATTTTAATGATTTGATT 150
BSNT_00385 1 ---------------ATGTTTTTTGCCTTGATCGGCCTTTTTTTGGGTTT 35
|||.||||.|.|.||..||||| ||.|||||.||.
RBAM_002640__ 151 GAAATGGCTCTGCAGATGGTTTTCGGCCTGGCCGGCC-TTGTTTGGATTA 199
BSNT_00385 36 TTATCGTTTCCCCATTTTCAAG-AAATTTCAAATTTCTGAACGCTTCAAA 84
||...||.|..||.|||||||| |||.|.|||.|.|||||.||.||||.|
RBAM_002640__ 200 TTGCTGTATTTCCGTTTTCAAGAAAAATCCAAGTGTCTGACCGTTTCAGA 249
BSNT_00385 85 CAAAAATCCGAAAACGCCCGCATAGTCGGTATGATCAACTTCGTATTAGA 134
||||||||.||||||.||||.||...|||.|||||..||||.||..|.||
RBAM_002640__ 250 CAAAAATCTGAAAACACCCGTATCACCGGAATGATAGACTTTGTCCTCGA 299
BSNT_00385 135 ACAAAAATACAAAAAAAGCATCTCTGAATAA 165
||||..|||||||.|.|..|||..|.||
RBAM_002640__ 300 ACAACGATACAAAGACATGATCAGTTAA--- 327
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