Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00374 and RBAM_002580
See
DNA alignment /
Visit
BSNT_00374 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence pep-align/BSNT_00374___ybeC.1.9828.seq
# -bsequence pep-align/RBAM_002580___ybeC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00374___ybeC-RBAM_002580___ybeC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00374___ybeC-RBAM_002580___ybeC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00374___ybeC
# 2: RBAM_002580___ybeC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 545
# Identity: 498/545 (91.4%)
# Similarity: 518/545 (95.0%)
# Gaps: 0/545 ( 0.0%)
# Score: 2619.0
#
#
#=======================================
BSNT_00374___ 1 MKGVYDMNQLHRRMGTFSLMMVGLGSMIGSGWLFGAWRAAQIAGPAAIIS 50
||||..|||||||||||:||||||||||||||||||||||||||||||||
RBAM_002580__ 1 MKGVNFMNQLHRRMGTFALMMVGLGSMIGSGWLFGAWRAAQIAGPAAIIS 50
BSNT_00374___ 51 WVIGMVVILFIALSYSELGSMFPEAGGMVKYTQYSHGSFIGFIAGWANWI 100
|:|||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_002580__ 51 WIIGMIVILFIALSYSELGSMFPEAGGMVKYTQYSHGSFIGFIAGWANWI 100
BSNT_00374___ 101 AIVSVIPVEAVASVQYMSSWPWEWAKWTSGLVKNGTLTGEGLAFASVLLL 150
|||||||||||||||||||||||||||||.||.|||||||||.||||||:
RBAM_002580__ 101 AIVSVIPVEAVASVQYMSSWPWEWAKWTSNLVHNGTLTGEGLGFASVLLI 150
BSNT_00374___ 151 IYFLLNYWTVNLFSKANSLITIFKIIIPGLTIGALLFVGFHGENFTGGQS 200
|||||||||||||||||||||||||||||||||||||.||||.|||.|.|
RBAM_002580__ 151 IYFLLNYWTVNLFSKANSLITIFKIIIPGLTIGALLFTGFHGGNFTSGSS 200
BSNT_00374___ 201 IAPNGWASVLTAVATSGIVFAFNGFQSPINMAGEAKNPGKSIPIAVVGSL 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002580__ 201 IAPNGWASVLTAVATSGIVFAFNGFQSPINMAGEAKNPGKSIPIAVVGSL 250
BSNT_00374___ 251 FVATVIYVLLQIAFIGAVNPSDIAHGWSHLNFNSPFADLAIALNINWLVI 300
.|||||||||||||||||.||.|.||||||||||||||||||||||||||
RBAM_002580__ 251 LVATVIYVLLQIAFIGAVEPSMIVHGWSHLNFNSPFADLAIALNINWLVI 300
BSNT_00374___ 301 VLYADAFVSPSGTGITYTATTSRMIYGMEKNKYMPSIFGKLHPIYGVPRQ 350
:||||||||||||||||||||||||||||||||||||||||||:||||||
RBAM_002580__ 301 ILYADAFVSPSGTGITYTATTSRMIYGMEKNKYMPSIFGKLHPLYGVPRQ 350
BSNT_00374___ 351 AMFFNLIVSFIFLFLFRGWGVLAEIISVATLISYITGPITVMTLRRTGKD 400
||.|||||||||||||||||||||||||||||||||||:||||||||..|
RBAM_002580__ 351 AMIFNLIVSFIFLFLFRGWGVLAEIISVATLISYITGPVTVMTLRRTAAD 400
BSNT_00374___ 401 LYRPLRLKGLNVIAPLGFIFASLVLYWARWPLTGQVLFIILIGLPIYFYY 450
||||||||||:|:|||||:|||||||||||||||||||||||||||||||
RBAM_002580__ 401 LYRPLRLKGLSVVAPLGFVFASLVLYWARWPLTGQVLFIILIGLPIYFYY 450
BSNT_00374___ 451 QAKAKWKGFGRNFKAGVWMMFYLLAMMVISYLGSDKFGGLNVIHYGWDMV 500
|||||||||.||||.||||:.|||:|||||:|||:||||||:|.|||||.
RBAM_002580__ 451 QAKAKWKGFRRNFKGGVWMVVYLLSMMVISWLGSEKFGGLNIIPYGWDMG 500
BSNT_00374___ 501 LIAMVSLVFYVWALKSGYQTEYLKDAKEINSQLLNGQSEAAAGKE 545
|||:|:|.||.||||||::||||||||.||.||..||:|||||||
RBAM_002580__ 501 LIAIVALAFYAWALKSGFKTEYLKDAKAINDQLKGGQAEAAAGKE 545
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.