Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00367 and RBAM_002550

See DNA alignment / Visit BSNT_00367 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_00367___csgA.1.9828.seq
#    -bsequence pep-align/RBAM_002550___csgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00367___csgA-RBAM_002550___csgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00367___csgA-RBAM_002550___csgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00367___csgA
# 2: RBAM_002550___csgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      63/83 (75.9%)
# Similarity:    70/83 (84.3%)
# Gaps:           1/83 ( 1.2%)
# Score: 317.0
# 
#
#=======================================

BSNT_00367___      1 -MDVTLGYLRESLSNHLENEVCQRICKKMLAKHYANEEEFVKDLDDNEMS     49
                      ||.||||||||||||||::||:.|.||:.|||||||.||||||:|.||.
RBAM_002550__      1 MMDRTLGYLRESLSNHLEHDVCRGIYKKLQAKHYANEGEFVKDLNDLEMD     50

BSNT_00367___     50 FLNHVLEKEIKYAQNEQDQKRAKELNEVYELLL     82
                     .||.|||||||||:||||:||..|||||||||.
RBAM_002550__     51 ALNQVLEKEIKYAENEQDEKRTMELNEVYELLF     83


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