Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01380 and RBAM_002480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence pep-align/BSNT_01380___yfiJ.1.9828.seq
# -bsequence pep-align/RBAM_002480.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01380___yfiJ-RBAM_002480.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01380___yfiJ-RBAM_002480.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01380___yfiJ
# 2: RBAM_002480
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity: 97/414 (23.4%)
# Similarity: 171/414 (41.3%)
# Gaps: 69/414 (16.7%)
# Score: 215.5
#
#
#=======================================
BSNT_01380___ 1 -----------------MYLSIVKEDNWFG--YVFIAAGAAMYAAN---H 28
::.:|::.....| .||::....|..|| .
RBAM_002480 1 MKIAHTKLLIRGFALLSIFHAILQLPPGRGELKVFLSVLVMMLTANDCLR 50
BSNT_01380___ 29 VLLTKETNAIW---FCLIDIAIGFSFGFIFP-GT-GLFIIMLCPVAVAFF 73
.|..|...|:: |.|.::..|.....::. || .:.:::|..|.:.
RBAM_002480 51 PLYMKRRPAVYQVSFLLSNVIAGVLLYNVYSVGTQAVMVLLLAEVLIT-- 98
BSNT_01380___ 74 LRGFPKRTAWSVLCLCSILFLIVLIRTYAMFGNEFVIDHLTSMTFVVFCG 123
.|:.:..:|.:.:..|...| || |...|.| :....|::|..
RBAM_002480 99 ----DKQISAVLLTMNAAAFAAAL---YA--GGAGVSD-IVPPYFIMFAV 138
BSNT_01380___ 124 VVGKLIRKLLDAQDTAKQQFQELTESHLALSAAHQELHLYAKQVEELTAI 173
:. |.|:.| |:.:| .||....|.: |:..|..|:.::|||...
RBAM_002480 139 IY--LYRRNL--QEKSK---VELLNRELKI--ANDTLKEYSDRIEELAVT 179
BSNT_01380___ 174 YERNRMAREIHDTVGHKMTALLVQLQLLREWQKRDSKKADETVGVCETLA 223
.||.|:|:|:||::||.:.||.:.|:...:.......|..:.:.....|.
RBAM_002480 180 KERTRIAQELHDSLGHYLAALKMNLEFAGKTAGHQPDKVKQIIHKAHDLT 229
BSNT_01380___ 224 REALDDVRLSVRTLQ-TENDPSLIESLKQLTEDFCKNAGVTTEFAVNGDP 272
:|::..:|.:|..|| :.......:.|:.:...|.:..|: .|.:..|.
RBAM_002480 230 KESILKLRQAVMLLQGSLPGRGFEQELRDIFSHFQEAGGI--RFELEMDA 277
BSNT_01380___ 273 AI---IPLSLHPTLIRTVQEALTNAKRHGGAAACSIQLACTTDSISLVIK 319
|| .|...| .|.::|||.:|||.:||.|:..|:::....:.|...|.
RBAM_002480 278 AIEAEQPDVKH-CLYQSVQETITNAIKHGHASYVSVRIQKNRNMILAHIH 326
BSNT_01380___ 320 DDGKGNPEAALGFGLLNMKKRAAEHGGTIRFESERDQGFTVNAEFSLANK 369
::|..........||..::||||..||...|.|.::.||.|........:
RBAM_002480 327 NNGSACGTIIKSNGLKGIEKRAAALGGEAVFSSGKETGFDVKIRIPCKEE 376
BSNT_01380___ 370 KWSFGPVQQKESLS 383
RBAM_002480 376 -------------- 376
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