Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01249 and RBAM_002470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence pep-align/BSNT_01249___yfnB.1.9828.seq
# -bsequence pep-align/RBAM_002470___yfnB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01249___yfnB-RBAM_002470___yfnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01249___yfnB-RBAM_002470___yfnB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01249___yfnB
# 2: RBAM_002470___yfnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity: 95/242 (39.3%)
# Similarity: 118/242 (48.8%)
# Gaps: 93/242 (38.4%)
# Score: 492.0
#
#
#=======================================
BSNT_01249___ 1 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTSNQ 50
|..|||||||:|:|:|||.|:|..||:.||:...:.||.:::|:||..||
RBAM_002470__ 1 MSHYRTLLFDIDNTLLDFTASETDALQKLFQGSKLELTAEVEARYKALNQ 50
BSNT_01249___ 51 GLWRAFEEGKMTRDEVVNTRFSALLKEYVYEADGALLEQKYRRFLEEGHQ 100
|||:|||||:|||||||||||:.|.|||..||||.|:.|.||::||||||
RBAM_002470__ 51 GLWKAFEEGEMTRDEVVNTRFALLFKEYGLEADGVLMNQAYRQYLEEGHQ 100
BSNT_01249___ 101 LIDGAFDLISNLQQQFDLYIVTNGVSNTQYKRLRDSGLFPFFK------- 143
:||||::||..|...|||||||||||.:|||||.||||:||.|
RBAM_002470__ 101 VIDGAYELIERLSPLFDLYIVTNGVSRSQYKRLGDSGLYPFLKMCLYLRT 150
BSNT_01249___ 144 DIFVSEDTGFQKPMKEYFDYVFERIPQFSAEHTLIIGDSLTADIKGGQLA 193
.:|.|.
RBAM_002470__ 151 RVFKSR-------------------------------------------- 156
BSNT_01249___ 194 GLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIENTVSS 235
RBAM_002470__ 156 ------------------------------------------ 156
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