Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06136 and RBAM_002450

See DNA alignment / Visit BSNT_06136 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:36
# Commandline: needle
#    -asequence pep-align/BSNT_06136___yxaD.1.9828.seq
#    -bsequence pep-align/RBAM_002450___yxaD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06136___yxaD-RBAM_002450___yxaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06136___yxaD-RBAM_002450___yxaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06136___yxaD
# 2: RBAM_002450___yxaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     112/143 (78.3%)
# Similarity:   127/143 (88.8%)
# Gaps:           0/143 ( 0.0%)
# Score: 567.0
# 
#
#=======================================

BSNT_06136___      1 MQNQNPVELIEYELTTFIRRAVYLDQSEKRTGNLERSSYLLLRQLDEFGP     50
                     |..|:|:||||||||||||||||||.|:::.|:|||::||||||||||||
RBAM_002450__      1 MSKQDPIELIEYELTTFIRRAVYLDNSDRKIGHLERAAYLLLRQLDEFGP     50

BSNT_06136___     51 ARVKELAESFKLDISTLSRQAAALEAKELIYRFSDPSDGRVSLFTITKLG    100
                     |||||||||||||||||||||||||:||||.|||||||||||||.|||||
RBAM_002450__     51 ARVKELAESFKLDISTLSRQAAALESKELIQRFSDPSDGRVSLFAITKLG    100

BSNT_06136___    101 KQLLKADQQKRLERYEQMLKEWSTQEKEMFGELLQRMNKAFID    143
                     ||.||||::.||:||..||.:||..|||.||.||.|:|:||||
RBAM_002450__    101 KQRLKADKKMRLDRYRHMLDDWSGDEKEKFGRLLLRLNEAFID    143


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