Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06136 and RBAM_002450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:36
# Commandline: needle
# -asequence dna-align/BSNT_06136___yxaD.1.9828.seq
# -bsequence dna-align/RBAM_002450___yxaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06136___yxaD-RBAM_002450___yxaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06136___yxaD-RBAM_002450___yxaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06136___yxaD
# 2: RBAM_002450___yxaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 327/440 (74.3%)
# Similarity: 327/440 (74.3%)
# Gaps: 16/440 ( 3.6%)
# Score: 1163.0
#
#
#=======================================
BSNT_06136___ 1 TTG-CAAAATCAAAATCCAGTTGAATTAATTGAATATGAGCTGACGACTT 49
||| ||||| |||.||||..||||||||||||||||||||||.||.||||
RBAM_002450__ 1 TTGTCAAAA-CAAGATCCGATTGAATTAATTGAATATGAGCTCACCACTT 49
BSNT_06136___ 50 TTATCAGGAGAGCTGTTTATCTGGATCAATCAGA--GAAAAGAACAGGGA 97
||||||||||||||||||||||.|||.|.||.|| |.||| |.| |||
RBAM_002450__ 50 TTATCAGGAGAGCTGTTTATCTTGATAACTCCGATCGTAAA-ATC--GGA 96
BSNT_06136___ 98 -ATTTGGAGAGATCTTCGTACTTATTACTGAGACAATTGGATGAGTTTGG 146
||.||||.||..||.||||.||.|||.|..|.||..|||||||.||.||
RBAM_002450__ 97 CATCTGGAAAGGGCTGCGTATTTGTTATTACGGCAGCTGGATGAATTCGG 146
BSNT_06136___ 147 GCCTGCTCGTGTTAAGGAATTGGCAGAATCGTTTAAGCTTGATATTTCTA 196
.||.||.|||||.||||||||.||.|||||.||||||||.||||||||.|
RBAM_002450__ 147 ACCGGCGCGTGTAAAGGAATTAGCCGAATCTTTTAAGCTGGATATTTCCA 196
BSNT_06136___ 197 CTCTTTCAAGACAAGCAGCTGCATTAGAGGCAAAGGAGCTCATCTATCGT 246
|..|.|||.|.||.||.||.||.||.|||.|.||.|||||.|||.|.|||
RBAM_002450__ 197 CATTGTCACGCCAGGCCGCGGCCTTGGAGTCGAAAGAGCTGATCCAGCGT 246
BSNT_06136___ 247 TTCTCAGACCCATCTGATGGGAGAGTCAGCCTGTTTACCATTACAAAACT 296
||.||.||.||.|||||.|||.|.|||||.||||||.|.|||||.||.||
RBAM_002450__ 247 TTTTCCGATCCTTCTGACGGGCGGGTCAGTCTGTTTGCGATTACGAAGCT 296
BSNT_06136___ 297 CGGCAAACAACTATTAAAAGCCGATCAGCAAAA----GCGCCTTGAACGT 342
.||||||||....||||||||.||| |||| |||.|||||.||.
RBAM_002450__ 297 TGGCAAACAGAGGTTAAAAGCTGAT----AAAAAGATGCGTCTTGATCGA 342
BSNT_06136___ 343 TATGAACAGATGCTGAAAGAATGGTCAACACAGGAAAAAGAGATGTTCGG 392
||...|||.|||||..|.||.||||||....|.||||||||.|.||||||
RBAM_002450__ 343 TACCGACATATGCTTGACGATTGGTCAGGCGATGAAAAAGAAAAGTTCGG 392
BSNT_06136___ 393 CGAGCTGCTGCAGCGTATGAACAAGGCTTTTATCGATTAA 432
|..|||..|||.|||..||||..||||.||||||||||||
RBAM_002450__ 393 CCGGCTTTTGCTGCGGCTGAATGAGGCATTTATCGATTAA 432
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