Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06138 and RBAM_002440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:36
# Commandline: needle
# -asequence pep-align/BSNT_06138.1.9828.seq
# -bsequence pep-align/RBAM_002440___yxaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06138-RBAM_002440___yxaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06138-RBAM_002440___yxaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06138
# 2: RBAM_002440___yxaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity: 183/230 (79.6%)
# Similarity: 206/230 (89.6%)
# Gaps: 0/230 ( 0.0%)
# Score: 953.0
#
#
#=======================================
BSNT_06138 1 MQQACIAIIIILLTVAAYLAMVKLYKRFPLPFLIPVLTTTILIVAALMMF 50
||||||||:|||.|.||||||||||.|||.|||||||||||.|:|.|::|
RBAM_002440__ 1 MQQACIAILIILFTAAAYLAMVKLYVRFPYPFLIPVLTTTIFIIAVLLVF 50
BSNT_06138 51 HVSYEGYMIGGKWINSLLGPAVVALAYPLYKQWHIIVKHCVPILGGVLVG 100
|:||:.|||||:||||||||||||||||||||..:::|:..||:||||.|
RBAM_002440__ 51 HISYKDYMIGGQWINSLLGPAVVALAYPLYKQRRVLIKYMFPIIGGVLAG 100
BSNT_06138 101 LCMGMISGLIFAEAFGIDHDLLLSILPKSITTPVAIQIAAGLGGVPSMTV 150
|..||:|||:|||.|||...|:|||:|||||||||||||:|:||||||||
RBAM_002440__ 101 LFSGMVSGLLFAELFGISRSLILSIIPKSITTPVAIQIASGIGGVPSMTV 150
BSNT_06138 151 VFVMIAGFSGVILGPLFLKWLRIRSSLGQGIALGSASHALGTSKALEYGE 200
||||||||||||||||.|||:|||||||:|||.||||||||||||:||||
RBAM_002440__ 151 VFVMIAGFSGVILGPLLLKWIRIRSSLGKGIAFGSASHALGTSKAMEYGE 200
BSNT_06138 201 LAVSMSSVSMTLCAVLGSFFGPLVVWLFHI 230
|.||||||||||||||||.|||:|.|:|.|
RBAM_002440__ 201 LTVSMSSVSMTLCAVLGSVFGPVVAWMFQI 230
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