Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00348 and RBAM_002320
See
DNA alignment /
Visit
BSNT_00348 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_00348___glmS.1.9828.seq
# -bsequence pep-align/RBAM_002320___glmS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00348___glmS-RBAM_002320___glmS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00348___glmS-RBAM_002320___glmS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00348___glmS
# 2: RBAM_002320___glmS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity: 559/600 (93.2%)
# Similarity: 589/600 (98.2%)
# Gaps: 0/600 ( 0.0%)
# Score: 2873.0
#
#
#=======================================
BSNT_00348___ 1 MCGIVGYIGQLDAKEILLKGLEKLEYRGYDSAGIAVANEQGIHVFKEKGR 50
|||||||||||||||||||||||||||||||||||||||||:||:|||||
RBAM_002320__ 1 MCGIVGYIGQLDAKEILLKGLEKLEYRGYDSAGIAVANEQGVHVYKEKGR 50
BSNT_00348___ 51 IADLREVVDANVEAKAGIGHTRWATHGEPSYLNAHPHQSALGRFTLVHNG 100
|||||||||.:||::|||||||||||||||:|||||||||||||||||||
RBAM_002320__ 51 IADLREVVDHSVESQAGIGHTRWATHGEPSFLNAHPHQSALGRFTLVHNG 100
BSNT_00348___ 101 VIENYVQLKQEYLQDVELKSDTDTEVVVQVIEQFVNGGLETEEAFRKTLT 150
|||||||||:|||::||||||||||||||:|||||.|||.||||||||||
RBAM_002320__ 101 VIENYVQLKREYLENVELKSDTDTEVVVQMIEQFVAGGLSTEEAFRKTLT 150
BSNT_00348___ 151 LLKGSYAIALFDNDNRETIFVAKNKSPLLVGLGDTFNVVASDAMAMLQVT 200
||||||||||||.:|.:||:|||||||||:||||||||||||||||||||
RBAM_002320__ 151 LLKGSYAIALFDGENTDTIYVAKNKSPLLIGLGDTFNVVASDAMAMLQVT 200
BSNT_00348___ 201 NEYVELMDKEMVIVTDDQVVIKNLDGDVITRASYIAELDASDIEKGTYPH 250
||||||:||||||||.|:.|||||||:|:|||||||||||||||||||||
RBAM_002320__ 201 NEYVELLDKEMVIVTKDEAVIKNLDGEVMTRASYIAELDASDIEKGTYPH 250
BSNT_00348___ 251 YMLKETDEQPVVMRKIIQTYQDENGKLSVPGDIAAAVAEADRIYIIGCGT 300
||||||||||:||||||||||||||:|:|.||:|.||||||||||:.|||
RBAM_002320__ 251 YMLKETDEQPLVMRKIIQTYQDENGRLAVAGDVADAVAEADRIYIVACGT 300
BSNT_00348___ 301 SYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGET 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002320__ 301 SYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGET 350
BSNT_00348___ 351 ADSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTK 400
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002320__ 351 ADSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTK 400
BSNT_00348___ 401 AYTAQIAVLAVLASVAADKNGIDIGFDLVKELAIAANAMEALCDQKDEME 450
||||||||||:||||||::||:||||||||||.|||||||||||||||||
RBAM_002320__ 401 AYTAQIAVLAILASVAAERNGVDIGFDLVKELGIAANAMEALCDQKDEME 450
BSNT_00348___ 451 MIAREYLTVSRNAFFIGRGLDYFVCVEGALKLKEISYIQAEGFAGGELKH 500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002320__ 451 MIAREYLTVSRNAFFIGRGLDYFVCVEGALKLKEISYIQAEGFAGGELKH 500
BSNT_00348___ 501 GTIALIEQGTPVFALATQEHVNLSIRGNVKEVAARGANTCIISLKGLDDA 550
|||||||:|||||||||||||||||||||||||||||||||||||||:||
RBAM_002320__ 501 GTIALIEEGTPVFALATQEHVNLSIRGNVKEVAARGANTCIISLKGLEDA 550
BSNT_00348___ 551 DDRFVLPEVNPALAPLVSVVPLQLIAYYAALHRGCDVDKPRNLAKSVTVE 600
||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_002320__ 551 DDRFILPEVNPALAPLVSVVPLQLIAYYAALHRGCDVDKPRNLAKSVTVE 600
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.