Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00345 and RBAM_002290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_00345___ybbR.1.9828.seq
# -bsequence pep-align/RBAM_002290___ybbR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00345___ybbR-RBAM_002290___ybbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00345___ybbR-RBAM_002290___ybbR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00345___ybbR
# 2: RBAM_002290___ybbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 389/490 (79.4%)
# Similarity: 432/490 (88.2%)
# Gaps: 17/490 ( 3.5%)
# Score: 1972.0
#
#
#=======================================
BSNT_00345___ 1 MDKFLNYRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEA 50
||||||.||||||||||||||||||||:||||||||||||||||||||||
RBAM_002290__ 1 MDKFLNNRWAVKIIALLFALLLYVAVNNNQAPTPKKPGESFFPTSTTDEA 50
BSNT_00345___ 51 TLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYAD 100
||||||||||||:.||||||||||||||||||||||||||||||||||||
RBAM_002290__ 51 TLTDIPVKAYYDEANYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYAD 100
BSNT_00345___ 101 MEHLKTGTHKVELKAKNVSDGMTISINPSVTTVTIQERTTKSFPVEVEYY 150
|..||||||||||||||||||:|||||||||||||||:|.:|||||||||
RBAM_002290__ 101 MNKLKTGTHKVELKAKNVSDGLTISINPSVTTVTIQEKTAESFPVEVEYY 150
BSNT_00345___ 151 NKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIE 200
|||||||||:|:|||:|||||||||||||||||||||||||||||:||||
RBAM_002290__ 151 NKSKMKKGYTPQQPIISPKNVQITGSKNVIDNISLVKASVNLENANETIE 200
BSNT_00345___ 201 KEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDG 250
||.||||||||||||||||||||||:||||.|||||:||||||.||||||
RBAM_002290__ 201 KEVKVTVYDKDGNALPVDVEPSVIKVTVPVASPSKKLPFKIERKGSLPDG 250
BSNT_00345___ 251 VSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADILL 300
||:|:|:|:||||||||.|||||||||||||||||.||:||:||.|||.|
RBAM_002290__ 251 VSVASIDSNPSEVTVYGPQDVLDSLEFIDGVSLDLGKIDKDTDINADIPL 300
BSNT_00345___ 301 PDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNIEYLDPESQ 350
|.||.|:||.|:|||::||||..:.|:||.||||||..||.||:||||||
RBAM_002290__ 301 PKGVTKVSPEKITLHVKVDSEDKKDFDNVGIKTVGLGGSQQIEFLDPESQ 350
BSNT_00345___ 351 AIDVTAKGSPANIKKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWS 400
||::||||||||||.|||||||||.|||||:||||||||||||||||||:
RBAM_002290__ 351 AINITAKGSPANIKALKKSDIELYANVSDLDDGEHSVKLEVNGPQNVTWA 400
BSNT_00345___ 401 LGRKNAKIKLTSKKSNTSTNDN------SSNTSGNQDDTDKQTNDQKNNQ 444
|.:...|||||||| |||:|.| |.|.:|...|.|| |:..|:
RBAM_002290__ 401 LSKDTVKIKLTSKK-NTSSNKNDGGSADSGNKNGTSGDADK---DKNKNR 446
BSNT_00345___ 445 QEDTKNTDKNNNDQNQDENKDQNQDQDEDESTANSQSSSE 484
::|| ::|||:.:|:|||||||||.|:|:|.|:.
RBAM_002290__ 447 EDDT------DSDQNKSQNQDQNQDQDEDGSSADSSSTE- 479
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