Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00343 and RBAM_002270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_00343___ybbM.1.9828.seq
# -bsequence pep-align/RBAM_002270___ybbM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00343___ybbM-RBAM_002270___ybbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00343___ybbM-RBAM_002270___ybbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00343___ybbM
# 2: RBAM_002270___ybbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 171/208 (82.2%)
# Similarity: 193/208 (92.8%)
# Gaps: 0/208 ( 0.0%)
# Score: 942.0
#
#
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BSNT_00343___ 1 MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIAL 50
||||||||||||.||||||||:||:||.:||::|..|::||:|||||:||
RBAM_002270__ 1 MSCPEQIVQLMHKHLDGDILPEDENVLKQHLQSCGNCKRHFHEMEKSVAL 50
BSNT_00343___ 51 VRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILM 100
|||||||.|||||||.|||.|||||||||||||.:|||:|||||||:|||
RBAM_002270__ 51 VRSTSHVTAPADFTAKVMANLPKEKKRASVKRWIKTHPMIAAAAVFVILM 100
BSNT_00343___ 101 GGGFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLII 150
||||||||||||||||||||||||.|||||||||||||||||||||||.|
RBAM_002270__ 101 GGGFFNSWHNDHNFSVSKQPNLVVQNHTVTVPEGETVKGDVTVKNGKLFI 150
BSNT_00343___ 151 KGKIDGDVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLD 200
:||:||:|||||||||||||||||||||||||||||.||::||||:.|:.
RBAM_002270__ 151 EGKVDGNVTVVNGEKYMASAGQVTGQIEEINQLFDWVWYELKSAGQGVVS 200
BSNT_00343___ 201 AFNPNGEE 208
|.:|:.:|
RBAM_002270__ 201 ALDPSEDE 208
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