Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00343 and RBAM_002270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence dna-align/BSNT_00343___ybbM.1.9828.seq
# -bsequence dna-align/RBAM_002270___ybbM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00343___ybbM-RBAM_002270___ybbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00343___ybbM-RBAM_002270___ybbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00343___ybbM
# 2: RBAM_002270___ybbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 628
# Identity: 504/628 (80.3%)
# Similarity: 504/628 (80.3%)
# Gaps: 2/628 ( 0.3%)
# Score: 2012.0
#
#
#=======================================
BSNT_00343___ 1 ATGAGCTGTCCTGAACAAATTGTGCAGCTTATGCATATGCATCTTGATGG 50
|||||||||||||||||.||.||||||||||||||||.||||||||||||
RBAM_002270__ 1 ATGAGCTGTCCTGAACAGATCGTGCAGCTTATGCATAAGCATCTTGATGG 50
BSNT_00343___ 51 AGATATCCTTCCAAAAGATGAACACGTATTAAATGAACATCTGGAGACAT 100
||||||||||||..||||||||.||||||||||..|||||.||.||.|||
RBAM_002270__ 51 AGATATCCTTCCTGAAGATGAAAACGTATTAAAACAACATTTGCAGTCAT 100
BSNT_00343___ 101 GCGAGAAATGCAGAAAGCATTTTTACGAGATGGAGAAATCCATAGCGCTT 150
|||.|||.||||.|..|||||||.|.||.||||||||||||.||||.||.
RBAM_002270__ 101 GCGGGAATTGCAAACGGCATTTTCATGAAATGGAGAAATCCGTAGCACTC 150
BSNT_00343___ 151 GTACGGAGCACATCGCATGTCGAAGCCCCCGCGGATTTTACCGCTAATGT 200
||.||.|||||||||||||||...|||||.||.||||||||.||.||.||
RBAM_002270__ 151 GTCCGAAGCACATCGCATGTCACGGCCCCTGCTGATTTTACTGCCAAAGT 200
BSNT_00343___ 201 CATGGCAAAATTGCCTAAGGAGAAGAAAAGAGCTTCTGTAAAAAGATGGT 250
.|||||.||..|.||.||.|||||.|||.|.||||||||||||.|||||.
RBAM_002270__ 201 TATGGCGAATCTTCCAAAAGAGAAAAAACGCGCTTCTGTAAAACGATGGA 250
BSNT_00343___ 251 TCAGAACCCATCCCGTTATCGCAGCTGCTGCGGTATTCATCATTTTGATG 300
|||.|||.|||||..|.||.|||||.||.|||||.||..|.|||||.|||
RBAM_002270__ 251 TCAAAACTCATCCGATGATTGCAGCCGCAGCGGTTTTTGTGATTTTAATG 300
BSNT_00343___ 301 GGCGGGGGTTTTTTTAACAGCTGGCATAATGACCACAATTTCAGCGTGTC 350
|||||.||||||||.|||||||||||||||||||||||||||||.|||||
RBAM_002270__ 301 GGCGGCGGTTTTTTCAACAGCTGGCATAATGACCACAATTTCAGTGTGTC 350
BSNT_00343___ 351 CAAGCAGCCGAATCTTGTGGTTCATAACCATACTGTGACCGTGCCAGAAG 400
|||.||||||||.|||||.||.||.||.||.||.||.|||||.|||||||
RBAM_002270__ 351 CAAACAGCCGAACCTTGTCGTGCAGAATCACACGGTCACCGTCCCAGAAG 400
BSNT_00343___ 401 GTGAGACGGTCAAAGGTGATGTCACTGTCAAAAACGGCAAGCTGATTATT 450
|.|||||.||.||.||.||||||||.||.|||||||||||||||.|.|||
RBAM_002270__ 401 GCGAGACCGTAAAGGGCGATGTCACAGTAAAAAACGGCAAGCTGTTCATT 450
BSNT_00343___ 451 AAAGGCAAAATAGACGGGGATGTAACCGTCGTAAACGGCGAAAAGTATAT 500
.||||.|||.|.|||||..||||.||||||||.|||||.|||||.||.||
RBAM_002270__ 451 GAAGGAAAAGTCGACGGCAATGTGACCGTCGTCAACGGAGAAAAATACAT 500
BSNT_00343___ 501 GGCCTCTGCTGGACAAGTCACCGGTCAGATTGAAGAAATCAATCAATTAT 550
||||||.||.||||||||||||||.|||||||||||.||.||.|||||.|
RBAM_002270__ 501 GGCCTCAGCCGGACAAGTCACCGGGCAGATTGAAGAGATTAACCAATTGT 550
BSNT_00343___ 551 TCGACTGGACATGGTACAAGATGAAGTCTGCGGGGAAAAGTGTACTCGA- 599
|.||||||...||||||.|..||||.||.|||||..|..|.|| |..||
RBAM_002270__ 551 TTGACTGGGTCTGGTACGAACTGAAATCGGCGGGCCAGGGCGT-CGTGAG 599
BSNT_00343___ 600 TGCATTCAATCCGAACGGAGAAGAGTAA 627
.||.||..|.||||..|.|||.||||||
RBAM_002270__ 600 CGCTTTGGACCCGAGTGAAGATGAGTAA 627
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