Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00342 and RBAM_002260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_00342___sigW.1.9828.seq
# -bsequence pep-align/RBAM_002260___sigW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00342___sigW-RBAM_002260___sigW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00342___sigW-RBAM_002260___sigW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00342___sigW
# 2: RBAM_002260___sigW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 179/187 (95.7%)
# Similarity: 185/187 (98.9%)
# Gaps: 0/187 ( 0.0%)
# Score: 909.0
#
#
#=======================================
BSNT_00342___ 1 MEMMIKKRIKQVKKGDQNAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQ 50
||.:|||||||||||||||||:|||:||||||||||||||||||||||||
RBAM_002260__ 1 MENLIKKRIKQVKKGDQNAFAEIVDLYKDKIYQLCYRMLGNVHEAEDIAQ 50
BSNT_00342___ 51 EAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002260__ 51 EAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAG 100
BSNT_00342___ 101 TEGLTMYSQIAADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYI 150
.||||||||||||||||||||:|||||:|||:||||||||||||||||||
RBAM_002260__ 101 AEGLTMYSQIAADGVLPEDAVLSLELSDTIQKKILKLPDKYRTVIVLKYI 150
BSNT_00342___ 151 DELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL 187
|||||||||||||||||||||||||||||||||||||
RBAM_002260__ 151 DELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL 187
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