Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00323 and RBAM_002180

See DNA alignment / Visit BSNT_00323 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence pep-align/BSNT_00323___murQ.1.9828.seq
#    -bsequence pep-align/RBAM_002180___murQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00323___murQ-RBAM_002180___murQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00323___murQ-RBAM_002180___murQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00323___murQ
# 2: RBAM_002180___murQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     223/309 (72.2%)
# Similarity:   257/309 (83.2%)
# Gaps:           5/309 ( 1.6%)
# Score: 1112.0
# 
#
#=======================================

BSNT_00323___      1 MSEPLNLHRLTTESRNSQTVEIHKANTLGILKMINNEDMKVAAAVQEVLP     50
                     |::.||:||||||:||.||..||:|:|:.||::||.||.|||.|||:|||
RBAM_002180__      1 MTDRLNIHRLTTETRNPQTASIHQADTMEILRIINQEDFKVAEAVQQVLP     50

BSNT_00323___     51 DIKTAVDCAYESFQNGGRLIYTGAGTSGRLGVMDAVECPPTYSVSPAQVI    100
                     ||:.||..|::|.:..|||||.||||||||||:|||||||||||||..||
RBAM_002180__     51 DIQIAVQFAHQSLRRNGRLIYAGAGTSGRLGVLDAVECPPTYSVSPDTVI    100

BSNT_00323___    101 GIMAGGPEAFLQAAEGIEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPY    150
                     |:||||.:||||||||||||||.||.||:.|.||:.||||||||||||||
RBAM_002180__    101 GLMAGGADAFLQAAEGIEDSEETGALDLKTIGLTAEDTVIAIAASGRTPY    150

BSNT_00323___    151 AAGALRYARKVGAHTIALTCNENSAISKDADHSIEVVVGPEAITGSTRMK    200
                     |||||:||:.:||.|:|||||::|.||..||||||||||||.||||||||
RBAM_002180__    151 AAGALKYAKTIGAKTVALTCNKHSLISTYADHSIEVVVGPEVITGSTRMK    200

BSNT_00323___    201 AATAHKMILNMISTAVMVKIGKVYENLMVDVNVSNKKLKERAISIIQSLT    250
                     |||||||||||||||||:|.|||||||||||:|||:|||||||.||||:|
RBAM_002180__    201 AATAHKMILNMISTAVMIKSGKVYENLMVDVHVSNEKLKERAIGIIQSIT    250

BSNT_00323___    251 NASYDTARYTLEQADHHVKTAIVMLKTSTDQKQAKTLLDEANGFIDKAIE    300
                     ...||.|:.|||.|..|||||||||||::|:..||.||.||.||||||||
RBAM_002180__    251 GVPYDKAKETLEAAGSHVKTAIVMLKTNSDETHAKALLKEAEGFIDKAIE    300

BSNT_00323___    301 HYHP-----    304
                     .:..     
RBAM_002180__    301 QHVSKEKER    309


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