Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00323 and RBAM_002180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence dna-align/BSNT_00323___murQ.1.9828.seq
# -bsequence dna-align/RBAM_002180___murQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00323___murQ-RBAM_002180___murQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00323___murQ-RBAM_002180___murQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00323___murQ
# 2: RBAM_002180___murQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 956
# Identity: 662/956 (69.2%)
# Similarity: 662/956 (69.2%)
# Gaps: 67/956 ( 7.0%)
# Score: 2235.5
#
#
#=======================================
BSNT_00323___ 1 ATGTCAGAACCATTAAACCTTCACCGTCTCACAACGGAATCACGCAATAG 50
|||.||||.|...|.|||.|||||.|..|.||.||.|||.|..|.|||..
RBAM_002180__ 1 ATGACAGACCGGCTTAACATTCACAGATTGACCACAGAAACCAGAAATCC 50
BSNT_00323___ 51 CCAAACAGTTGAAATCCACAAAGCAAACAC---------TCTCGGCATCC 91
.||.||.|.|..||||||..|||||.|||| ||||.|||||
RBAM_002180__ 51 GCAGACCGCTTCAATCCATCAAGCAGACACGATGGAAATTCTCCGCATC- 99
BSNT_00323___ 92 TCAAAATGATCAACAACGAAGATATGAAAGTCGCTGCAGCCGTTCAAGAG 141
||.|||.|.||.|||.|.|||||.||||.|||||||||..||
RBAM_002180__ 100 --------ATTAACCAAGAGGATTTCAAAGTGGCTGAAGCCGTTCAGCAG 141
BSNT_00323___ 142 GTTCTCCCCGACATCAAAACAGCTGTAGACTGCGCTTATGAATCGTTTC- 190
||.||.|||||.||..|.|..||.||..|.|.|||..||.|.||.||.|
RBAM_002180__ 142 GTGCTGCCCGATATTCAGATTGCCGTTCAATTCGCCCATCAGTCCTTACG 191
BSNT_00323___ 191 ---AAAATGGAGGCCGGCTCATATATACAGGCGCCGGCACAAGTGGCAGA 237
||| .|||.||||.||.|||.|.||.||.||||||||.||||||
RBAM_002180__ 192 GCGAAA----CGGCAGGCTGATTTATGCGGGAGCGGGCACAAGCGGCAGA 237
BSNT_00323___ 238 CTCGGCGTCATGGATGCTGTTGAATGTCCTCCCACCTACAGCGTAAGCCC 287
|||||.||..|||||||.||||||||.||.||.||.|||||||||||.||
RBAM_002180__ 238 CTCGGTGTACTGGATGCGGTTGAATGCCCGCCTACATACAGCGTAAGTCC 287
BSNT_00323___ 288 AG---CTCAGGTCATCGGAATCATGGCTGGAGGCCCCGAAGCCTTTTTAC 334
.| || ||||||||..|.|||||.|||||..|.||.||||||||.|
RBAM_002180__ 288 CGACACT---GTCATCGGTCTGATGGCCGGAGGAGCAGACGCCTTTTTGC 334
BSNT_00323___ 335 AGGCAGCAGAGGGCATTGAAGACAGTGAAGAAGCAGGAGCTGAAGATTTA 384
|.||.||.||.||.|||||||||||.||.|||.|.||.|||...|||.|.
RBAM_002180__ 335 AAGCGGCTGAAGGTATTGAAGACAGCGAGGAAACCGGCGCTCTCGATCTC 384
BSNT_00323___ 385 AGAAAC-ATACAGCTCACTTCAAATGACACCGTCATTGCCATCGCAGCAA 433
| |||| ||...|||.||..||.|.||||||||.||.||||||||.||||
RBAM_002180__ 385 A-AAACGATCGGGCTTACCGCAGAAGACACCGTGATCGCCATCGCGGCAA 433
BSNT_00323___ 434 GCGGCCGCACACCCTACGCCGCAGGCGCCCTAAGATACGCCCGCAA---- 479
||||.|||||.||.||.||.||.||.||.||.|.||| |||||
RBAM_002180__ 434 GCGGGCGCACGCCGTATGCGGCCGGTGCGCTGAAATA----CGCAAAAAC 479
BSNT_00323___ 480 AGTCGGAGCACACACCATCGCCCTTACTTGTAATGAAAATTCCGCCATCA 529
|.||||.||..|.||..||||.||.||.||.|||.||.|.||....||||
RBAM_002180__ 480 AATCGGCGCCAAAACTGTCGCGCTCACATGCAATAAACACTCATTGATCA 529
BSNT_00323___ 530 GCAAGGATGCGGATCACAGCATTGAGGTTGTCGTCGGACCTGAGGCCATT 579
|||...||||.||||||||||||||.||.||||||||.||.||.|..|||
RBAM_002180__ 530 GCACTTATGCCGATCACAGCATTGAAGTCGTCGTCGGCCCCGAAGTGATT 579
BSNT_00323___ 580 ACAGGATCAACACGTATGAAAGCCGCAACCGCTCATAAAATGATTCTAAA 629
|||||.||||||||.||||||||.||.||.||.||||||||||||||.||
RBAM_002180__ 580 ACAGGGTCAACACGAATGAAAGCGGCGACGGCACATAAAATGATTCTGAA 629
BSNT_00323___ 630 CATGATATCTACCGCTGTAATGGTCAAAATCGGCAAGGTTTACGAAAACT 679
||||||.||.||.||.||.|||.||||||.||||||.||.||||||||.|
RBAM_002180__ 630 CATGATTTCCACGGCCGTGATGATCAAAAGCGGCAAAGTGTACGAAAATT 679
BSNT_00323___ 680 TGATGGTAGACGTCAACGTCAGCAACAAAAAACTAAAAGAACGCGCCATC 729
|.|||||.|||||..|.||.||||||.|||||.|.|||||||||||.|||
RBAM_002180__ 680 TAATGGTGGACGTTCATGTGAGCAACGAAAAATTGAAAGAACGCGCAATC 729
BSNT_00323___ 730 AGCATTATCCAAAGCCTTACAAACGCTTCATACGACACAGCCAGATACAC 779
.||||||||||||||.|.||...||.|.|.|||||||..||.|.|.|.||
RBAM_002180__ 730 GGCATTATCCAAAGCATCACGGGCGTTCCGTACGACAAGGCAAAAGAAAC 779
BSNT_00323___ 780 TCTGGAACAAGCCGATCA-----TCACGTCAAAACAGCAATCGTCATGCT 824
.||.| |.|||| || .||.||||||||.||||||||||||||
RBAM_002180__ 780 GCTTG---AGGCCG--CAGGCAGCCATGTCAAAACGGCAATCGTCATGCT 824
BSNT_00323___ 825 CAAAACAAGCACAGATCAGAAACAAGCAAAGACATTACTCGATGAAGCAA 874
.||.||.|...||||..|.|.|||.||.|||.||.|.|||.|.|||||..
RBAM_002180__ 825 GAAGACGAATTCAGACGAAACACACGCGAAGGCACTGCTCAAAGAAGCGG 874
BSNT_00323___ 875 ACGGTTTCATTGACAAAGCAATCGAACATTACCATCCA------------ 912
|.||.||||||||||||||.||.|||||..||..|.||
RBAM_002180__ 875 AAGGCTTCATTGACAAAGCCATTGAACAGCACGTTTCAAAAGAAAAAGAA 924
BSNT_00323___ 913 ---TGA 915
|||
RBAM_002180__ 925 CGCTGA 930
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