Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00319 and RBAM_002160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence pep-align/BSNT_00319___ybbE.1.9828.seq
# -bsequence pep-align/RBAM_002160___ybbE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00319___ybbE-RBAM_002160___ybbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00319___ybbE-RBAM_002160___ybbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00319___ybbE
# 2: RBAM_002160___ybbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 323/441 (73.2%)
# Similarity: 367/441 (83.2%)
# Gaps: 14/441 ( 3.2%)
# Score: 1700.0
#
#
#=======================================
BSNT_00319___ 1 MKTKTLFIFSAILTLSIFAPNETFAQTADNLVEPKTINAETAQFSTKKLK 50
|||.|..|.:.:::|| |.|.. ...|::..:...||:
RBAM_002160__ 1 MKTLTAAILTMVISLS-FLPQH-------------KAEAQSKLYDAAKLR 36
BSNT_00319___ 51 KVDQMIERDIAAGFPGAVLVVVKDGRIIKKEAYGYSKKYEGSELLRRPAK 100
|||||||:||||||||||||||||||:|||:||||||||:|:.||.||.|
RBAM_002160__ 37 KVDQMIEKDIAAGFPGAVLVVVKDGRVIKKKAYGYSKKYDGNTLLSRPKK 86
BSNT_00319___ 101 MKTRTMFDLASNTKMYATNFVLQRLVSQGKLDVYEKVSAYLPGFKDQPGD 150
|||.|||||||||||||.||.|||||||||||||:|||||||.|||:..|
RBAM_002160__ 87 MKTSTMFDLASNTKMYAANFALQRLVSQGKLDVYQKVSAYLPDFKDRKSD 136
BSNT_00319___ 151 LIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYYSQERDKTIEYLTKI 200
.|:.||:||||||||||||||:|||||.|:.||..|||||||||.:||:|
RBAM_002160__ 137 PIQEKDRIRVIDVLQHQSGLPASFYFYQPDTAGPLYSQERDKTIRFLTQI 186
BSNT_00319___ 201 PLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTL 250
||.|:.|||||||||||||||||:|.:|||.||.|.||||||||:|.|||
RBAM_002160__ 187 PLAYKPGTKHVYSDIGYMLLGCIIENITGKTLDAYAEQELYKPLKLTHTL 236
BSNT_00319___ 251 YNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSM 300
:||||||||.|.||||||:||||||||.||:|||.|||||||||||||||
RBAM_002160__ 237 FNPLQKGFKEKAFAATERLGNTRDGVIHFPHIRTYTLQGEVHDEKAFYSM 286
BSNT_00319___ 301 DGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSATD 350
.||||||||||.|||||:|||||||.|||:::|||:::||||||..:::|
RBAM_002160__ 287 GGVSGHAGLFSRADDMAVLLQVMLNGGSYKHVSLFNKRTADLFTTAASSD 336
BSNT_00319___ 351 PTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIIDPAYNLGIAL 400
||||||||:|||..|||||||:||..||||||||||:|||||||.|||||
RBAM_002160__ 337 PTFALGWRKNGSPDMEWMFGPYASWQAYGHTGWTGTITIIDPAYKLGIAL 386
BSNT_00319___ 401 LTNKKHTPVIDPEENPNVFEGDQFATGSYGSVITAIYEAME 441
||||||:||:.|.|||||||||.|.|||||.||..||||:|
RBAM_002160__ 387 LTNKKHSPVVSPGENPNVFEGDLFPTGSYGRVIKTIYEAIE 427
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