Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00317 and RBAM_002150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence pep-align/BSNT_00317___ybbD.1.9828.seq
# -bsequence pep-align/RBAM_002150___ybbD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00317___ybbD-RBAM_002150___ybbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00317___ybbD-RBAM_002150___ybbD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00317___ybbD
# 2: RBAM_002150___ybbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 644
# Identity: 482/644 (74.8%)
# Similarity: 556/644 (86.3%)
# Gaps: 9/644 ( 1.4%)
# Score: 2501.5
#
#
#=======================================
BSNT_00317___ 1 MRPVFPLILSAVLFLSCFFGARQTEASASKRAI--DANQIVNRMSLDEKL 48
..|::||||.|...|| |...::|..| .|.|.|:||:|||||
RBAM_002150__ 1 ----MKLVISAVLLLFIVFG---THHVSTKPDIPSQAEQAVSRMTLDEKL 43
BSNT_00317___ 49 GQMLMPDFRNWQKEGESSPQALTEMNDEVASLVKKYQFGGIILFAENVKT 98
|||||||||||||:|:|||:|||:||.|||.|::||:|||:||||||||.
RBAM_002150__ 44 GQMLMPDFRNWQKKGQSSPEALTQMNKEVAGLIQKYRFGGVILFAENVKN 93
BSNT_00317___ 99 TKQTVQLTDDYQKASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMALGAAR 148
|:|||:|||.:|||||.|||:|||||||||||||||||:|||||||||||
RBAM_002150__ 94 TEQTVRLTDAFQKASPDIPLLLSIDQEGGIVTRLGEGTHFPGNMALGAAR 143
BSNT_00317___ 149 SRINAYQTGSIIGKELSALGINTDFSPVVDINNNPNNPVIGVRSFSSNRE 198
....|.|||:||||||.||||||:|:||:||||||.|||||||||||:|:
RBAM_002150__ 144 KTAYASQTGAIIGKELKALGINTNFAPVLDINNNPGNPVIGVRSFSSDRD 193
BSNT_00317___ 199 LTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLR 248
||:.|||.:||..|:||:|:|:||||||||||||||||||||:|.|||||
RBAM_002150__ 194 LTASLGLASMKAQQKQDVAAAVKHFPGHGDTDVDSHYGLPLVTHNQERLR 243
BSNT_00317___ 249 EVELYPFQKAIDAGADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSK 298
::|||||:|||.|||||:||||||||||||||||||||||||||||||||
RBAM_002150__ 244 QIELYPFRKAIQAGADMIMTAHVQFPAFDDTTYKSKLDGSDILVPATLSK 293
BSNT_00317___ 299 KVMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVRAGVDIALM 348
||||.|||.||||||||||||||||||||||||||||||||:||||||||
RBAM_002150__ 294 KVMTHLLRGEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVKAGVDIALM 343
BSNT_00317___ 349 PASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGM 398
||.||||:.|.:||||..|||:||:.|:||.||||.|.|||||||||||:
RBAM_002150__ 344 PAQVTSLQTENRFARVHSALKKAVQKGEIPLQQINKSAERIISLKIKRGI 393
BSNT_00317___ 399 YPARNSDSTKEKIAKAKKIVGSKQHLKAEKKIAEKAVTVLKNEQHTLPFK 448
|||....:.|:|||||||.||||.||||||:|||::||||:|:..|||||
RBAM_002150__ 394 YPAPKKTNLKKKIAKAKKTVGSKNHLKAEKQIAERSVTVLQNKNRTLPFK 443
BSNT_00317___ 449 PKKGSRILIVAPYEEQTASIEQTIHDLIKRKKIKPVSVDKMNFANQVFKA 498
|||.||:||.||||:||||:||||..|||:|||:||::.|||||.:.|..
RBAM_002150__ 444 PKKNSRVLIAAPYEDQTASMEQTIRQLIKKKKIRPVTISKMNFAERTFHD 493
BSNT_00317___ 499 EHAKQVKKADYIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMK 548
||.||:..|||:||||||||||||||||||||:::|..||.|.|||||||
RBAM_002150__ 494 EHKKQISDADYVITGSYVVKNDPVVNDGVIDDSVTDPGKWTTAFPRAVMK 543
BSNT_00317___ 549 AALQHNKPFVLMSLRNPYDAANFEETKALIAVYGFKGYANGRYLQPNIPA 598
||..:.|||||||||||||||||||.:|||||||||||.:|::|||||||
RBAM_002150__ 544 AAQSNQKPFVLMSLRNPYDAANFEEAEALIAVYGFKGYTDGQFLQPNIPA 593
BSNT_00317___ 599 GVMAIFGQAKPKGTLPVDIPSVTKPGNTLYPFGYGLNIKTGRPL 642
||.|||||.||:|.||.||||||.||.||||:|:|:|:|||:||
RBAM_002150__ 594 GVEAIFGQTKPQGRLPADIPSVTHPGTTLYPYGFGINLKTGKPL 637
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