Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00315 and RBAM_002140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence pep-align/BSNT_00315___ybbC.1.9828.seq
# -bsequence pep-align/RBAM_002140___ybbC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00315___ybbC-RBAM_002140___ybbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00315___ybbC-RBAM_002140___ybbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00315___ybbC
# 2: RBAM_002140___ybbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity: 314/414 (75.8%)
# Similarity: 354/414 (85.5%)
# Gaps: 0/414 ( 0.0%)
# Score: 1676.0
#
#
#=======================================
BSNT_00315___ 1 MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKK 50
|:....|.|.||::...:||.||:.|....|||||.:|||||.||.|||:
RBAM_002140__ 1 MKTQTAALLAGLVVISAMTAVSAASDRNLHTAKKPSIQTGIDRLLKDYKQ 50
BSNT_00315___ 51 QLKGKRIGLITNPTGVNASLKSSVDILYENPDIKLTALFGPEHGVRGDAQ 100
:|||||:||||||||||.|||||||:|||.|||.||||||||||||||||
RBAM_002140__ 51 ELKGKRVGLITNPTGVNNSLKSSVDVLYEAPDIHLTALFGPEHGVRGDAQ 100
BSNT_00315___ 101 AGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFY 150
|||:|.||||||||:|||||||:|:||||:|||:.|:|:|||||||||:|
RBAM_002140__ 101 AGDKVTSYIDEKTGLPVYSLYGETRKPTPDMLKDTDVLIFDIQDVGTRYY 150
BSNT_00315___ 151 TYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPDYASFVGLY 200
|||||||||||||||.||||.||||||||||.:.:||:||||||||||||
RBAM_002140__ 151 TYIYTMAYAMEAAKEKGIPFYVLDRPNPQGGRNPDGPVLEPDYASFVGLY 200
BSNT_00315___ 201 PIPLKHGMTIGELALLFNKEFSINADLTVVKMKHWKRKMDFDDTRLPFVL 250
|||||||||||||||||||||.|.|||||||||.|||.|..:||.|||||
RBAM_002140__ 201 PIPLKHGMTIGELALLFNKEFHIGADLTVVKMKRWKRTMTIEDTGLPFVL 250
BSNT_00315___ 251 PSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEE 300
||||:||.:|.|.|.|||||||||:||||||||||||||||::|||||||
RBAM_002140__ 251 PSPNIPTPDSIFAYSATGLIEGTNVSEGRGTTKPFELIGAPYMKSTELEE 300
BSNT_00315___ 301 TLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTERDKFEAVKTGLS 350
.||||.|||||||||||.|:|||||..||||||:|||.|:.|||.|||||
RBAM_002140__ 301 RLNSLKLPGVTFRAASFIPSFSKHQSKLCHGVQVYVTNRNTFEAAKTGLS 350
BSNT_00315___ 351 VIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSIENIINSYEKT 400
::||:|||||.||.||.|||||||.||||:|.|||.|.|||:|..:|::.
RBAM_002140__ 351 ILKTMHDLYPNDFLFLPTGSFDKLIGNGWVRKKIEKGASIEDITGTYQRR 400
BSNT_00315___ 401 LQQFSKTRKKYLIY 414
|.||...||:||||
RBAM_002140__ 401 LDQFKTLRKQYLIY 414
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