Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00313 and RBAM_002130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence pep-align/BSNT_00313___ybbB.1.9828.seq
# -bsequence pep-align/RBAM_002130___ybbB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00313___ybbB-RBAM_002130___ybbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00313___ybbB-RBAM_002130___ybbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00313___ybbB
# 2: RBAM_002130___ybbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 539
# Identity: 302/539 (56.0%)
# Similarity: 396/539 (73.5%)
# Gaps: 18/539 ( 3.3%)
# Score: 1596.0
#
#
#=======================================
BSNT_00313___ 1 MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTN 50
|:|.:.:||:.|..:|||:||.||.||.||.|||||:||.|.|.|||::.
RBAM_002130__ 1 MKNTLFFQPIDIISVKKTADLLSEHQLTDSPVLIFHVKGEGQIDIGTDSF 50
BSNT_00313___ 51 PLQKKTLYVCPPNETFGFTPAADGHIDACLIRLQ--SY-------IKEAG 91
||||:|||:||.:|||...|...|.|...::||: || :.:.|
RBAM_002130__ 51 PLQKETLYICPCDETFNIAPIPSGGIHLYIVRLRVFSYSSDNEAMLPDNG 100
BSNT_00313___ 92 QDIFTPCTESELAKLKLINVSHIENLAVRLQELAALWNESSQLSQLKCGI 141
:||| ..|:.:|:..:::|..|||.|:.....:..|.::|...
RBAM_002130__ 101 EDIF--------HGLQQMNLQTVDHLTSRLQSLSENVRSADALQKMKYTA 142
BSNT_00313___ 142 EVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGI 191
:.|.|:|||:.|.:..|.:|.:|||:||.:|.|.:||||||.||:.||||
RBAM_002130__ 143 DFQQLMYDLYAAKVCHQNNTKAAIEQTKQFIHTQSDTKITLTQLAHMAGI 192
BSNT_00313___ 192 SAKHYSESFKKWTGQSVTEFITKTRITKAKLLMAKSNCKLKEIAHQTGYQ 241
|.|||||:|||..||||||:||..|||.||.||||:||||:|||||.|||
RBAM_002130__ 193 SPKHYSETFKKLYGQSVTEYITDIRITNAKKLMAKANCKLREIAHQIGYQ 242
BSNT_00313___ 242 DEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHIPFAAA 291
|||||||||||:||.||||||||||.|:||||:.||||||||||:|:|||
RBAM_002130__ 243 DEFYFSRIFKKHTGSSPTSYMKKRRTKMAAYGKETMGHLIPLHHVPYAAA 292
BSNT_00313___ 292 LHPKWTSYYYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVSMDS 341
||||||:|||:.:|:||||.|||||:|..|||||:|||||.||:|.|:||
RBAM_002130__ 293 LHPKWTAYYYKQFSSDIPVHLSAYRYNANWEENLHTLSQAAPDIIFSLDS 342
BSNT_00313___ 342 ISPEEQDRLNRIAEVMYLPSEESWRTHFLQTASFLKEESEAEKWLADYDQ 391
:|.||:.|||.|.:|.|||::|:||..||:||::|.||.||..||..|..
RBAM_002130__ 343 VSEEEKQRLNDITDVFYLPAQENWRDQFLRTAAYLNEEQEARHWLKAYQS 392
BSNT_00313___ 392 QTTAAKKTLQHVQGLRFLFLRLHKQNFYLAHNRSVREVFFGDLGLSSATT 441
...:||..|:||:..||||:|::|:|.|:|||.|:.:|||||||.:||..
RBAM_002130__ 393 LAHSAKDALKHVRHQRFLFVRVYKENMYIAHNNSIEDVFFGDLGFASAKP 442
BSNT_00313___ 442 ADTPSEQAISLENIANYQADCMMLFLFKEPETIAYYQQLQQTEAWQNLSA 491
.....::.|||:.:|:.||||:|||..|||||:.|:|::|||..||||.|
RBAM_002130__ 443 ESFAPDEKISLDMLADCQADCIMLFTCKEPETLRYFQRIQQTGIWQNLRA 492
BSNT_00313___ 492 VRNKRVYLLSLDPWNEYSACGHERIVQQTVSLLSGDCP- 529
|.||||:.:|.|||.|||..||:|:::|::|:||.|.|
RBAM_002130__ 493 VSNKRVFPISSDPWIEYSPSGHQRMIEQSISILSEDRPW 531
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