Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00310 and RBAM_002110

See DNA alignment / Visit BSNT_00310 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence pep-align/BSNT_00310___feuB.1.9828.seq
#    -bsequence pep-align/RBAM_002110___feuB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00310___feuB-RBAM_002110___feuB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00310___feuB-RBAM_002110___feuB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00310___feuB
# 2: RBAM_002110___feuB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     284/335 (84.8%)
# Similarity:   313/335 (93.4%)
# Gaps:           1/335 ( 0.3%)
# Score: 1453.0
# 
#
#=======================================

BSNT_00310___      1 MYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIHFDPGNT     50
                     ||:|:.|.:|:|.||.||.||||||:|||||.|....||::|:||:|.||
RBAM_002110__      1 MYAKRRTHMIIIASPIAIVLSLLLSVLYGAKQLDIHTVFSALLHFNPENT     50

BSNT_00310___     51 DHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGS    100
                     ||||||||||||||||:.||||||||||||||||||||||||||||||||
RBAM_002110__     51 DHQIIWHSRIPRAAGAMFIGAALAVSGALMQGITRNYLASPSIMGVSDGS    100

BSNT_00310___    101 AFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMMPNGFTPVQL    150
                     ||||||||||||||:||||:||||||||.||.||||||:::|.|||||||
RBAM_002110__    101 AFIITLCMVLLPQSTSIEMIIYSFIGSAFGAALVFGLASILPGGFTPVQL    150

BSNT_00310___    151 AIIGTVTSMLLSSLSAAMSIYFQISQDLSFWYSARLHQMSPDFLKLAAPF    200
                     |||||||||||||||||:|||||||||||||||||||||:|||||||.||
RBAM_002110__    151 AIIGTVTSMLLSSLSAALSIYFQISQDLSFWYSARLHQMNPDFLKLAVPF    200

BSNT_00310___    201 FLIGIIMAISLSKKVTAVSLGDDISKSLGQKKKTIKIMAMLSVIILTGSA    250
                     |.||||.|:.||||||||||||||||||||:|:|||:|||.:|:|||||:
RBAM_002110__    201 FAIGIITAMILSKKVTAVSLGDDISKSLGQQKRTIKLMAMAAVVILTGSS    250

BSNT_00310___    251 VALAGKIAFVGLVVPHITRFLVGSDYSRLIPCSCLLGGIFLTLCDLASRF    300
                     ||||||||||||||||||||||||||||||||:|::||:|||||||||||
RBAM_002110__    251 VALAGKIAFVGLVVPHITRFLVGSDYSRLIPCACIIGGVFLTLCDLASRF    300

BSNT_00310___    301 INYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG-    334
                     ||||||||||||||||||||||||||||||:|.| 
RBAM_002110__    301 INYPFETPIEVVTSIIGVPFFLYLIKRKGGDQRGA    335


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