Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00310 and RBAM_002110

See Amino acid alignment / Visit BSNT_00310 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence dna-align/BSNT_00310___feuB.1.9828.seq
#    -bsequence dna-align/RBAM_002110___feuB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00310___feuB-RBAM_002110___feuB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00310___feuB-RBAM_002110___feuB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00310___feuB
# 2: RBAM_002110___feuB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1018
# Identity:     777/1018 (76.3%)
# Similarity:   777/1018 (76.3%)
# Gaps:          23/1018 ( 2.3%)
# Score: 2916.0
# 
#
#=======================================

BSNT_00310___      1 ATGTATTCAAAACAGTGGACACGTATCATATTGATTACTTCTCCATTTGC     50
                     ||||||.||||||.|.||||||..||.||..|.|||.||||.||..||||
RBAM_002110__      1 ATGTATGCAAAACGGCGGACACACATGATTATCATTGCTTCACCGATTGC     50

BSNT_00310___     51 TATAGCGCTGTCACTTTTGCTTTCAATCCTTTAT--GGGGCAAAGCATCT     98
                     .||.|..||||||||..|||||||..|  |||||  ||.||||||||.||
RBAM_002110__     51 CATTGTTCTGTCACTGCTGCTTTCCGT--TTTATACGGCGCAAAGCAGCT     98

BSNT_00310___     99 TAGCACAGATATTGTTTTTACATCTC-----TTATTCATTTCGATCCGGG    143
                     |..||...|||..||.|     ||||     |..|.||.||..||||||.
RBAM_002110__     99 TGACATCCATACCGTGT-----TCTCCGCATTGCTGCACTTTAATCCGGA    143

BSNT_00310___    144 AAACACAGACCATCAAATTATATGGCACTCCCGGATTCCAAGGGCTGCCG    193
                     .||.||.||||||||.||.||||||||.||..|.||.||.||||||||||
RBAM_002110__    144 GAATACCGACCATCAGATCATATGGCATTCAAGAATCCCGAGGGCTGCCG    193

BSNT_00310___    194 GCGCTCTGCTCATAGGGGCAGCCCTTGCTGTTTCTGGAGCGCTTATGCAG    243
                     |||||.||.|.||.||.||.||||||||||||||.||||||||.||||||
RBAM_002110__    194 GCGCTATGTTTATCGGCGCCGCCCTTGCTGTTTCCGGAGCGCTCATGCAG    243

BSNT_00310___    244 GGCATCACGCGCAATTATTTAGCTTCGCCATCCATTATGGGTGTTTCAGA    293
                     ||.|||||.||.||.|||.|.||.|||||.||.||.||||||||.||.||
RBAM_002110__    244 GGAATCACACGGAACTATCTGGCCTCGCCTTCAATCATGGGTGTGTCGGA    293

BSNT_00310___    294 TGGTTCAGCGTTTATCATTACGCTTTGCATGGTTCTGCTCCCGCAATCAT    343
                     .||.||.||.||||||||.||.|||||||||||..|||||||.|||||..
RBAM_002110__    294 CGGCTCCGCTTTTATCATCACCCTTTGCATGGTATTGCTCCCTCAATCGA    343

BSNT_00310___    344 CTTCGATTGAAATGATGATATACTCTTTTATCGGCTCAGCGTTAGGAGCT    393
                     |.||.|||||||||||.||||||||.||||||||.||.||.||.||.||.
RBAM_002110__    344 CATCCATTGAAATGATCATATACTCGTTTATCGGTTCCGCATTCGGCGCC    393

BSNT_00310___    394 G-TGTTAGTATTCGGCCTTGCCGCCATGATGCCAAACGGATTTACCCCCG    442
                     | |.|| ||.|||||.||.|||.||||..|.||...|||.||||||||.|
RBAM_002110__    394 GCTCTT-GTTTTCGGGCTGGCCTCCATTCTTCCCGGCGGTTTTACCCCGG    442

BSNT_00310___    443 TGCAGCTCGCCATCATCGGCACAGTCACAAGCATGCTGCTCAGCAGCTTA    492
                     |||||||.|||||.|||||.||.||.||.||.|||||.||||||||..|.
RBAM_002110__    443 TGCAGCTTGCCATTATCGGAACGGTGACCAGTATGCTTCTCAGCAGTCTG    492

BSNT_00310___    493 TCAGCGGCCATGTCGATTTATTTTCAAATTTCTCAGGATCTCAGTTTCTG    542
                     ||.||.||..|.||||||||||||||||||||.||||||||||||||.||
RBAM_002110__    493 TCGGCTGCGCTTTCGATTTATTTTCAAATTTCGCAGGATCTCAGTTTTTG    542

BSNT_00310___    543 GTACAGTGCCAGACTTCATCAAATGAGTCCGGATTTCCTGAAGCTTGCCG    592
                     |||||||||.|||||.||||||||||..||.|||||..||||.||.||||
RBAM_002110__    543 GTACAGTGCGAGACTGCATCAAATGAACCCTGATTTTTTGAAACTGGCCG    592

BSNT_00310___    593 CTCCGTTTTTCCTG--ATTGGCATCATAATGGCCATTTCTCTCAGCAAAA    640
                     ..||||||||  ||  ||.||.|||||.|.||||||...|||||||||||
RBAM_002110__    593 TCCCGTTTTT--TGCAATCGGAATCATCACGGCCATGATTCTCAGCAAAA    640

BSNT_00310___    641 AGGTAACCGCTGTATCATTAGGGGACGACATTTCTAAAAGCCTGGGGCAA    690
                     ||||.||.||.|||||||||||.|||||||||||.|||||.|||||.||.
RBAM_002110__    641 AGGTCACTGCCGTATCATTAGGAGACGACATTTCAAAAAGTCTGGGACAG    690

BSNT_00310___    691 AAGAAAAAAACCATTAAAATCATGGCGATGCTTTCCGTCATCATTTTAAC    740
                     .||||||.||||||.|||.|||||||||||....||||..||||.||.||
RBAM_002110__    691 CAGAAAAGAACCATCAAACTCATGGCGATGGCGGCCGTTGTCATATTGAC    740

BSNT_00310___    741 CGGCAGTGCCGTAGCGCTGGCCGGAAAAATTGCGTTTGTCGGGTTGGTTG    790
                     .||.||..|.||.||.||.||||||||||||||.||||||||.|||||.|
RBAM_002110__    741 AGGAAGCTCGGTGGCACTCGCCGGAAAAATTGCCTTTGTCGGTTTGGTCG    790

BSNT_00310___    791 TTCCGCATATCACGAGATTTCTCGTCGGCTCTGATTACAGCAGGCTGATT    840
                     |||||||.|||||..|.|||||||||||.||.||.||||||||||||||.
RBAM_002110__    791 TTCCGCACATCACACGTTTTCTCGTCGGATCGGACTACAGCAGGCTGATC    840

BSNT_00310___    841 CCGTGCTCCTGTCTTTTGGGCGGAATCTTTTTAACCCTGTGTGATCTCGC    890
                     ||.|||.|.||..|..|.|||||..||||..|.|||||.||.||.||.||
RBAM_002110__    841 CCATGCGCGTGCATCATCGGCGGCGTCTTCCTGACCCTTTGCGACCTTGC    890

BSNT_00310___    891 AAGCAGATTTATCAACTATCCGTTTGAAACACCGATTGAGGTCGTAACAT    940
                     .|||.||||.|||||.|||||||||||.||.||.|||||.||.||.||.|
RBAM_002110__    891 CAGCCGATTCATCAATTATCCGTTTGAGACGCCTATTGAAGTTGTCACTT    940

BSNT_00310___    941 CCATTATCGGCGTACCTTTCTTCCTTTATTTAATTAAACGAAAAGGAGGG    990
                     |.||.|||||.||.||||||||.||||||||.||||||.|||||||||||
RBAM_002110__    941 CTATCATCGGTGTTCCTTTCTTTCTTTATTTGATTAAAAGAAAAGGAGGG    990

BSNT_00310___    991 GAGCAAAATGG---CTAA   1005
                     ||.||...|||   .|||
RBAM_002110__    991 GATCAGCGTGGTGCGTAA   1008


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