Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00310 and RBAM_002110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence dna-align/BSNT_00310___feuB.1.9828.seq
# -bsequence dna-align/RBAM_002110___feuB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00310___feuB-RBAM_002110___feuB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00310___feuB-RBAM_002110___feuB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00310___feuB
# 2: RBAM_002110___feuB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1018
# Identity: 777/1018 (76.3%)
# Similarity: 777/1018 (76.3%)
# Gaps: 23/1018 ( 2.3%)
# Score: 2916.0
#
#
#=======================================
BSNT_00310___ 1 ATGTATTCAAAACAGTGGACACGTATCATATTGATTACTTCTCCATTTGC 50
||||||.||||||.|.||||||..||.||..|.|||.||||.||..||||
RBAM_002110__ 1 ATGTATGCAAAACGGCGGACACACATGATTATCATTGCTTCACCGATTGC 50
BSNT_00310___ 51 TATAGCGCTGTCACTTTTGCTTTCAATCCTTTAT--GGGGCAAAGCATCT 98
.||.|..||||||||..|||||||..| ||||| ||.||||||||.||
RBAM_002110__ 51 CATTGTTCTGTCACTGCTGCTTTCCGT--TTTATACGGCGCAAAGCAGCT 98
BSNT_00310___ 99 TAGCACAGATATTGTTTTTACATCTC-----TTATTCATTTCGATCCGGG 143
|..||...|||..||.| |||| |..|.||.||..||||||.
RBAM_002110__ 99 TGACATCCATACCGTGT-----TCTCCGCATTGCTGCACTTTAATCCGGA 143
BSNT_00310___ 144 AAACACAGACCATCAAATTATATGGCACTCCCGGATTCCAAGGGCTGCCG 193
.||.||.||||||||.||.||||||||.||..|.||.||.||||||||||
RBAM_002110__ 144 GAATACCGACCATCAGATCATATGGCATTCAAGAATCCCGAGGGCTGCCG 193
BSNT_00310___ 194 GCGCTCTGCTCATAGGGGCAGCCCTTGCTGTTTCTGGAGCGCTTATGCAG 243
|||||.||.|.||.||.||.||||||||||||||.||||||||.||||||
RBAM_002110__ 194 GCGCTATGTTTATCGGCGCCGCCCTTGCTGTTTCCGGAGCGCTCATGCAG 243
BSNT_00310___ 244 GGCATCACGCGCAATTATTTAGCTTCGCCATCCATTATGGGTGTTTCAGA 293
||.|||||.||.||.|||.|.||.|||||.||.||.||||||||.||.||
RBAM_002110__ 244 GGAATCACACGGAACTATCTGGCCTCGCCTTCAATCATGGGTGTGTCGGA 293
BSNT_00310___ 294 TGGTTCAGCGTTTATCATTACGCTTTGCATGGTTCTGCTCCCGCAATCAT 343
.||.||.||.||||||||.||.|||||||||||..|||||||.|||||..
RBAM_002110__ 294 CGGCTCCGCTTTTATCATCACCCTTTGCATGGTATTGCTCCCTCAATCGA 343
BSNT_00310___ 344 CTTCGATTGAAATGATGATATACTCTTTTATCGGCTCAGCGTTAGGAGCT 393
|.||.|||||||||||.||||||||.||||||||.||.||.||.||.||.
RBAM_002110__ 344 CATCCATTGAAATGATCATATACTCGTTTATCGGTTCCGCATTCGGCGCC 393
BSNT_00310___ 394 G-TGTTAGTATTCGGCCTTGCCGCCATGATGCCAAACGGATTTACCCCCG 442
| |.|| ||.|||||.||.|||.||||..|.||...|||.||||||||.|
RBAM_002110__ 394 GCTCTT-GTTTTCGGGCTGGCCTCCATTCTTCCCGGCGGTTTTACCCCGG 442
BSNT_00310___ 443 TGCAGCTCGCCATCATCGGCACAGTCACAAGCATGCTGCTCAGCAGCTTA 492
|||||||.|||||.|||||.||.||.||.||.|||||.||||||||..|.
RBAM_002110__ 443 TGCAGCTTGCCATTATCGGAACGGTGACCAGTATGCTTCTCAGCAGTCTG 492
BSNT_00310___ 493 TCAGCGGCCATGTCGATTTATTTTCAAATTTCTCAGGATCTCAGTTTCTG 542
||.||.||..|.||||||||||||||||||||.||||||||||||||.||
RBAM_002110__ 493 TCGGCTGCGCTTTCGATTTATTTTCAAATTTCGCAGGATCTCAGTTTTTG 542
BSNT_00310___ 543 GTACAGTGCCAGACTTCATCAAATGAGTCCGGATTTCCTGAAGCTTGCCG 592
|||||||||.|||||.||||||||||..||.|||||..||||.||.||||
RBAM_002110__ 543 GTACAGTGCGAGACTGCATCAAATGAACCCTGATTTTTTGAAACTGGCCG 592
BSNT_00310___ 593 CTCCGTTTTTCCTG--ATTGGCATCATAATGGCCATTTCTCTCAGCAAAA 640
..|||||||| || ||.||.|||||.|.||||||...|||||||||||
RBAM_002110__ 593 TCCCGTTTTT--TGCAATCGGAATCATCACGGCCATGATTCTCAGCAAAA 640
BSNT_00310___ 641 AGGTAACCGCTGTATCATTAGGGGACGACATTTCTAAAAGCCTGGGGCAA 690
||||.||.||.|||||||||||.|||||||||||.|||||.|||||.||.
RBAM_002110__ 641 AGGTCACTGCCGTATCATTAGGAGACGACATTTCAAAAAGTCTGGGACAG 690
BSNT_00310___ 691 AAGAAAAAAACCATTAAAATCATGGCGATGCTTTCCGTCATCATTTTAAC 740
.||||||.||||||.|||.|||||||||||....||||..||||.||.||
RBAM_002110__ 691 CAGAAAAGAACCATCAAACTCATGGCGATGGCGGCCGTTGTCATATTGAC 740
BSNT_00310___ 741 CGGCAGTGCCGTAGCGCTGGCCGGAAAAATTGCGTTTGTCGGGTTGGTTG 790
.||.||..|.||.||.||.||||||||||||||.||||||||.|||||.|
RBAM_002110__ 741 AGGAAGCTCGGTGGCACTCGCCGGAAAAATTGCCTTTGTCGGTTTGGTCG 790
BSNT_00310___ 791 TTCCGCATATCACGAGATTTCTCGTCGGCTCTGATTACAGCAGGCTGATT 840
|||||||.|||||..|.|||||||||||.||.||.||||||||||||||.
RBAM_002110__ 791 TTCCGCACATCACACGTTTTCTCGTCGGATCGGACTACAGCAGGCTGATC 840
BSNT_00310___ 841 CCGTGCTCCTGTCTTTTGGGCGGAATCTTTTTAACCCTGTGTGATCTCGC 890
||.|||.|.||..|..|.|||||..||||..|.|||||.||.||.||.||
RBAM_002110__ 841 CCATGCGCGTGCATCATCGGCGGCGTCTTCCTGACCCTTTGCGACCTTGC 890
BSNT_00310___ 891 AAGCAGATTTATCAACTATCCGTTTGAAACACCGATTGAGGTCGTAACAT 940
.|||.||||.|||||.|||||||||||.||.||.|||||.||.||.||.|
RBAM_002110__ 891 CAGCCGATTCATCAATTATCCGTTTGAGACGCCTATTGAAGTTGTCACTT 940
BSNT_00310___ 941 CCATTATCGGCGTACCTTTCTTCCTTTATTTAATTAAACGAAAAGGAGGG 990
|.||.|||||.||.||||||||.||||||||.||||||.|||||||||||
RBAM_002110__ 941 CTATCATCGGTGTTCCTTTCTTTCTTTATTTGATTAAAAGAAAAGGAGGG 990
BSNT_00310___ 991 GAGCAAAATGG---CTAA 1005
||.||...||| .|||
RBAM_002110__ 991 GATCAGCGTGGTGCGTAA 1008
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