Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00304 and RBAM_002070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence pep-align/BSNT_00304___ybaR.1.9828.seq
# -bsequence pep-align/RBAM_002070___ybaR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00304___ybaR-RBAM_002070___ybaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00304___ybaR-RBAM_002070___ybaR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00304___ybaR
# 2: RBAM_002070___ybaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity: 377/478 (78.9%)
# Similarity: 411/478 (86.0%)
# Gaps: 44/478 ( 9.2%)
# Score: 1896.0
#
#
#=======================================
BSNT_00304___ 1 MNDSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDPMVGLYA 50
||||||
RBAM_002070__ 1 --------------------------------------------MVGLYA 6
BSNT_00304___ 51 SFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGI 100
||||||||||||||||||||||||||||||:||||:||||||||||||||
RBAM_002070__ 7 SFCIAIIISIFGGRPGMISAATGSMAVVMVTLVADYGLQYLFAATILTGI 56
BSNT_00304___ 101 IQVILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGASWSMYA 150
||.|||:||||:|||||||||||||||||||||||||||||:||||.|||
RBAM_002070__ 57 IQFILGVSKIAKLMKFIPRSVMIGFVNALAILIFSAQLPQFKGASWVMYA 106
BSNT_00304___ 151 MLAGSLVIIYVLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNIS 200
||||||.|||:||:.|||||||||||||||||||.||.|||||||||.|:
RBAM_002070__ 107 MLAGSLAIIYLLPKVTTAVPSPLVAIIVMTIIAVVFHADVRTVGDMGGIT 156
BSNT_00304___ 201 SSLPHFLIPDVPFTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMTDTD 250
||||||||||||:|||||::|||||:||||||||||||||||||||||||
RBAM_002070__ 157 SSLPHFLIPDVPWTFETLRVIFPYSLALAFVGLLESLLTAQIIDEMTDTD 206
BSNT_00304___ 251 SDKNKESRGQGIANIVTGFFGGMAGCAMIGQSVINTKAGGRGRLSAFVAG 300
||||||||||||||||.||||||||||||||||||||||||||||||.||
RBAM_002070__ 207 SDKNKESRGQGIANIVNGFFGGMAGCAMIGQSVINTKAGGRGRLSAFTAG 256
BSNT_00304___ 301 AFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWSSLKGLKKAPLTDS 350
|||||||||||.:|||||||||||||||||:|||||||:|||:|||||||
RBAM_002070__ 257 AFLMFLIAVLSGIVVKIPMAALVAVMVMVSIGTFDWSSIKGLRKAPLTDS 306
BSNT_00304___ 351 IVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVSHAEDQKLR 400
||||:||||||:|:|||||||.||||||:||.||||||||.||:|.:.:|
RBAM_002070__ 307 IVMVITVVTVVLTNDLSKGVFAGVLLSAIFFTAKISKLKIESHSEQKDVR 356
BSNT_00304___ 401 TYQVKGQIFFASVTDLTNAFIYQEDIERVVIDLTEAHVWDDSGAAALDKI 450
||:|.||||||||::|.||.:|.||::|:|||||:||||||||||||:||
RBAM_002070__ 357 TYKVTGQIFFASVSELMNAIVYDEDVKRIVIDLTDAHVWDDSGAAALEKI 406
BSNT_00304___ 451 VAKFKEQGIEAELKGLNKASKSLMKQMA 478
|||.||.||||||||||:.|:.||||||
RBAM_002070__ 407 VAKCKEYGIEAELKGLNQKSRDLMKQMA 434
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