Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01789 and RBAM_002030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence pep-align/BSNT_01789___glcP.1.9828.seq
# -bsequence pep-align/RBAM_002030___glcP1.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01789___glcP-RBAM_002030___glcP1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01789___glcP-RBAM_002030___glcP1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01789___glcP
# 2: RBAM_002030___glcP1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 431
# Identity: 124/431 (28.8%)
# Similarity: 210/431 (48.7%)
# Gaps: 52/431 (12.1%)
# Score: 445.5
#
#
#=======================================
BSNT_01789___ 1 MLRGTYL----FGY-AFFFTVGIIHISTGSLTPFLLESFNKTTDDISVII 45
|::...| |.| :..||:.|: |::.|.||..::::..:..|::
RBAM_002030__ 1 MMKTRLLWISCFSYGSIAFTLVIL----GAVLPELLTHYSQSYSNGGVLV 46
BSNT_01789___ 46 FFQFTGFLSGVLIAPLMIKKYSHFRTLTLALTIMLAALSIFFLTKDWYYI 95
|.||.|||.||:..|.|:||......:...|.::...:.|.|| ..|..:
RBAM_002030__ 47 FSQFMGFLIGVIGMPYMVKKLGRKNVVIFGLALISCEMFITFL-PPWPLL 95
BSNT_01789___ 96 IVMAFLLGYGAGTLETTVGSFVI-ANFESNAEKMSKLEVLFGLGALSFPL 144
.::..:.|.|||.:|:.||:.:: |..|..|..|||:||.:|||||..||
RBAM_002030__ 96 FLLVSIAGLGAGLVESCVGTIILTAIKERQAVAMSKMEVAYGLGALFMPL 145
BSNT_01789___ 145 LINSFIDINNWFLPYYCIFTFLFVLFVGWLIFLSKNRKYAKNANQQVTFP 194
|....|:.:.|.:.:..:....|.|.:.| :|::|
RBAM_002030__ 146 LSGFLINNHMWTIAFLVLGLSSFALLIAW---------------KQMSF- 179
BSNT_01789___ 195 DGGAFQYFI-----GDRKKSKQLGF------FVFFA----FLYAGIETNF 229
|...|..| .|..|.:..|: |:..| |.|.|.|.:.
RBAM_002030__ 180 -GSIDQLLIRKEVSSDDTKKESTGYRSHGLLFIALAGAYFFFYGGSEVSI 228
BSNT_01789___ 230 ANFLPSIMINQDN--EQISLISVSFFWVGIIIGRILIGLVSRRLDFSKYL 277
.:|:|||...:.: ..::.|:|:.:|.|:||||:|.|.||.:|.:.:||
RBAM_002030__ 229 VHFIPSIFAEKWDIPNSLATITVTVYWTGMIIGRLLTGPVSEKLTYHRYL 278
BSNT_01789___ 278 -LFSCSCLIVL-LIAFSYISNPILQLGGTFLIGLSIAGIFPIALTLASII 325
|.|...|..| ::|.| .|........|.:||.:||:|.|||.:.:..
RBAM_002030__ 279 RLISIGGLAALTVLALS--KNVWFGFALCFFLGLFMAGMFAIALIITNHF 326
BSNT_01789___ 326 IQKYVDEVTSLFIASASFGGAIISFLIGWSLNQDTILLTMGIFTTMAVIL 375
.....:..||:.:||...||:::...:||||::........:||.:.:::
RBAM_002030__ 327 YPGKTETTTSILLASNGLGGSLLPIAVGWSLDEYPAQTAFWLFTALMLLM 376
BSNT_01789___ 376 VGISVKIRRTKTEDPISLENKASKTRVNERY 406
:.|...:|..:|....:|::..||.:..
RBAM_002030__ 377 LLIVFSLRMLETIKSNNLQHHNSKAKSM--- 404
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