Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00264 and RBAM_001810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence pep-align/BSNT_00264___gerD.1.9828.seq
# -bsequence pep-align/RBAM_001810___gerD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00264___gerD-RBAM_001810___gerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00264___gerD-RBAM_001810___gerD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00264___gerD
# 2: RBAM_001810___gerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 157/185 (84.9%)
# Similarity: 171/185 (92.4%)
# Gaps: 0/185 ( 0.0%)
# Score: 817.0
#
#
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BSNT_00264___ 1 MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKA 50
||||||||:|||:|||||||||||||||||||||||||||||||||||||
RBAM_001810__ 1 MSKAKTLLISCFVLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKA 50
BSNT_00264___ 51 IKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEG 100
|||:||||||||||||||:|:|||||||||||||.||||.||||:.|||.
RBAM_001810__ 51 IKEILNDDAMNEALVIDQNAVKGTIEKTLTSKKGAEFWKTIFEDSKFAES 100
BSNT_00264___ 101 FAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRS 150
||||||.||||:||||||||||||..|.:||||||||||.:|.|||:|||
RBAM_001810__ 101 FAKTLQPEHEKIIKKLMKDPDYQKSFMQIMQDPGMDKKYYELVKSQKFRS 150
BSNT_00264___ 151 YLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE 185
|||:||.|||||||:||||||||||||..:.|||:
RBAM_001810__ 151 YLEDVITETLSSPLFKKQFEDELKKAASSSEKESQ 185
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