Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00263 and RBAM_001800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence pep-align/BSNT_00263___ybaL.1.9828.seq
# -bsequence pep-align/RBAM_001800___ybaL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00263___ybaL-RBAM_001800___ybaL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00263___ybaL-RBAM_001800___ybaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00263___ybaL
# 2: RBAM_001800___ybaL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 314/352 (89.2%)
# Similarity: 332/352 (94.3%)
# Gaps: 2/352 ( 0.6%)
# Score: 1636.0
#
#
#=======================================
BSNT_00263___ 1 MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKT 50
||||||||.:||.||||||.||||||||:||:||||||||:|||:|||||
RBAM_001800__ 1 MIREDEVRNIVGNMREPFLHRPLGELDAIKEVKIKPEKRHVSVKIALAKT 50
BSNT_00263___ 51 GTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLL 100
||||||.:|||||:|||.|||||||||||||||||:|||..|:||.:|||
RBAM_001800__ 51 GTAEQMGVQQEIVSVLKEAGAETVGLRFEELPEETLAKFSRPAAESETLL 100
BSNT_00263___ 101 NMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSV 150
|..:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001800__ 101 NRKHPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSV 150
BSNT_00263___ 151 PDMMGITVRPTIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKM 200
|||||||||||:||||||||||||||||||||||||||||||||||||||
RBAM_001800__ 151 PDMMGITVRPTVEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKM 200
BSNT_00263___ 201 LNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTA 250
||||||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_001800__ 201 LNNFFHEVDWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTA 250
BSNT_00263___ 251 AFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDKLAE 300
|||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_001800__ 251 AFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGQGGGDKLAE 300
BSNT_00263___ 301 ELNVPLLGRIPLKQPDWDKDQFAPSVYDENHPIGEIYQDIAKKIDAKMSV 350
||.|||||||||||||||||||||||||.:|||||||..||:|:..|.:.
RBAM_001800__ 301 ELQVPLLGRIPLKQPDWDKDQFAPSVYDRSHPIGEIYMGIAQKVIEKTAE 350
BSNT_00263___ 351 QV 352
RBAM_001800__ 350 -- 350
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