Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00262 and RBAM_001790

See DNA alignment / Visit BSNT_00262 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00262___cwlD.1.9828.seq
#    -bsequence pep-align/RBAM_001790___cwlD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00262___cwlD-RBAM_001790___cwlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00262___cwlD-RBAM_001790___cwlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00262___cwlD
# 2: RBAM_001790___cwlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     206/237 (86.9%)
# Similarity:   223/237 (94.1%)
# Gaps:           0/237 ( 0.0%)
# Score: 1105.0
# 
#
#=======================================

BSNT_00262___      1 MRKKLKWLSFLLGFIILLFLFKYQFSNNDSWKPWSLPLSGKIIYLDPGHG     50
                     |.||||||.|||||||||.||::||.|:|||:||||||||||||||||||
RBAM_001790__      1 MTKKLKWLGFLLGFIILLCLFRFQFHNDDSWRPWSLPLSGKIIYLDPGHG     50

BSNT_00262___     51 GPDGGAVGGKLLEKDVTLEVAFRVRDYLQEQGALVIMTRESDTDLAPEGT    100
                     ||||||.||..||||:|||||.||||||||||||||||||:|||||||||
RBAM_001790__     51 GPDGGATGGSHLEKDITLEVASRVRDYLQEQGALVIMTRETDTDLAPEGT    100

BSNT_00262___    101 KGYSRRKAEDLRQRVKLINHSEAELYISIHLNAIPSQKWSGAQSFYYGKY    150
                     ||||||||||||:||::||.||||||||||||||||.:||||||||||||
RBAM_001790__    101 KGYSRRKAEDLRKRVEIINRSEAELYISIHLNAIPSPRWSGAQSFYYGKY    150

BSNT_00262___    151 AENEKVAKYIQDELRRNLENTTRKAKRIHGIYLMQNVTKPGALIEVGFLS    200
                     .||||||||||||||.|||||||||||||||||||||||||||:|:||||
RBAM_001790__    151 EENEKVAKYIQDELRINLENTTRKAKRIHGIYLMQNVTKPGALVEIGFLS    200

BSNT_00262___    201 NPSEATLLGKPKYQDKVASSIYKGILRYFTEKGDPPE    237
                     ||:||..||:||||||:|||:|||:||||||||||||
RBAM_001790__    201 NPAEAKRLGQPKYQDKIASSVYKGVLRYFTEKGDPPE    237


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