Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00262 and RBAM_001790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence dna-align/BSNT_00262___cwlD.1.9828.seq
# -bsequence dna-align/RBAM_001790___cwlD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00262___cwlD-RBAM_001790___cwlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00262___cwlD-RBAM_001790___cwlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00262___cwlD
# 2: RBAM_001790___cwlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 721
# Identity: 545/721 (75.6%)
# Similarity: 545/721 (75.6%)
# Gaps: 14/721 ( 1.9%)
# Score: 2022.5
#
#
#=======================================
BSNT_00262___ 1 ATGAGGAAAAAGCTTAAATGGCTCAGTTTTTTGCTAGGCTTCATCATATT 50
||||..||||||||.|||||||||.|||||||.||.|||||.||||||||
RBAM_001790__ 1 ATGACAAAAAAGCTGAAATGGCTCGGTTTTTTACTTGGCTTTATCATATT 50
BSNT_00262___ 51 ACTATTTCTGTTCAAGTATCAGTTCAGCAATAACGACTCTTGGAAGCCGT 100
|.|.|.|.|.|||..||.|||.|||...|||.|.||.||.|||..|||||
RBAM_001790__ 51 ATTGTGTTTATTCCGGTTTCAATTCCATAATGATGATTCCTGGCGGCCGT 100
BSNT_00262___ 101 GGAGCCTGCCCTTGAGCGGTAAAATCATTTATCTAGATCCAGGTCATGGC 150
||||.|||||..|||||||.||||||||.|||||.|||||.||.||.|||
RBAM_001790__ 101 GGAGTCTGCCGCTGAGCGGGAAAATCATCTATCTCGATCCGGGACACGGC 150
BSNT_00262___ 151 GGGCCTGACGGCGGAG-CAGTCGGCGGAAAGCTGT----TAGAGAAGGAT 195
|||||.|||||.||.| || |||.|.||.|| |.||.|||||.
RBAM_001790__ 151 GGGCCGGACGGAGGCGCCA-----CGGGAGGCAGTCACCTTGAAAAGGAC 195
BSNT_00262___ 196 GTTACCCTGGAAGTGGCCTTTAGAGTCAGGGATTATCTTCAAGAACAAGG 245
.||||.||.||||||||||..||.|||||.||.|||.|.||.||.||.||
RBAM_001790__ 196 ATTACTCTCGAAGTGGCCTCCAGGGTCAGAGACTATTTGCAGGAGCAGGG 245
BSNT_00262___ 246 AGCGCTTGTTATCATGACCAGAGAAAGTGATACTGATCTCGCTCCAGAAG 295
.||..|.||.||.|||||..|.||.|..|||||||||.|.|||||.||||
RBAM_001790__ 246 GGCTTTGGTCATTATGACGCGGGAGACGGATACTGATTTAGCTCCTGAAG 295
BSNT_00262___ 296 GAACAAAAGGCTATAGCCGACGAAAAGCTGAGGATCTAAGACAACGAGTC 345
|.||.||||||||.|||.||||.|||||.||.|||||.|||.|.||.||.
RBAM_001790__ 296 GGACGAAAGGCTACAGCAGACGCAAAGCGGAAGATCTGAGAAAGCGCGTG 345
BSNT_00262___ 346 AAATTAATAAACCATTCAGAGGCGGAGCTCTATATCAGCATTCATCTTAA 395
.|..|.||.||||.|||||||||||||||.|||||||||||||||||.||
RBAM_001790__ 346 GAGATCATCAACCGTTCAGAGGCGGAGCTTTATATCAGCATTCATCTGAA 395
BSNT_00262___ 396 TGCGATTCCGTCACAAAAATGGAGCGGCGCCCAAAGCTTTTATTACGGGA 445
.||.||.|||||||..|.|||||||||||||||||||||.||.||.||.|
RBAM_001790__ 396 CGCCATACCGTCACCGAGATGGAGCGGCGCCCAAAGCTTCTACTATGGAA 445
BSNT_00262___ 446 AATATGCGGAAAATGAGAAAGTCGCAAAATACATTCAGGATGAGCTGAGA 495
||||.|..||||||||.|||||.||||||||.||.|||||.||..|||||
RBAM_001790__ 446 AATACGAAGAAAATGAAAAAGTGGCAAAATATATACAGGACGAATTGAGA 495
BSNT_00262___ 496 AGAAATCTGGAAAACACAACCCGGAAAGCAAAGCGGATTCATGGTATCTA 545
|..|||.||||.||.|||||..|.||.||.||.|||||.||.||.||.||
RBAM_001790__ 496 ATCAATTTGGAGAATACAACGAGAAAGGCGAAACGGATACACGGCATTTA 545
BSNT_00262___ 546 CTTAATGCAAAACGTCACCAAACCGGGGGCGCTTATAGAAGTCGGGTTTT 595
|||||||||.||.||.|||||||||||.|||||..|.||..||||.|||.
RBAM_001790__ 546 CTTAATGCAGAATGTAACCAAACCGGGCGCGCTGGTGGAGATCGGATTTC 595
BSNT_00262___ 596 TATCCAATCCAAGTGAAGC--AACGTTGCTCGGTAAACCGAAATATCAAG 643
|.||||||||....||||| ||.| ||||||..|.||.||||||||.|
RBAM_001790__ 596 TGTCCAATCCCGCGGAAGCGAAAAG--GCTCGGCCAGCCCAAATATCAGG 643
BSNT_00262___ 644 ACAAGGTGGCATCTTCCATATATAAAGGCATTTTGCGATATTTCACAGAA 693
||||..|.||.||||||.|.|||||.|||.|.|||.||||.|||||.||.
RBAM_001790__ 644 ACAAAATCGCTTCTTCCGTGTATAAGGGCGTATTGAGATACTTCACCGAG 693
BSNT_00262___ 694 AAAGGAGACCCTCCGGAGTAA 714
||||||||||||||.||||||
RBAM_001790__ 694 AAAGGAGACCCTCCTGAGTAA 714
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