Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00260 and RBAM_001780

See DNA alignment / Visit BSNT_00260 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00260___ybaK.1.9828.seq
#    -bsequence pep-align/RBAM_001780___ybaK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00260___ybaK-RBAM_001780___ybaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00260___ybaK-RBAM_001780___ybaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00260___ybaK
# 2: RBAM_001780___ybaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     110/147 (74.8%)
# Similarity:   126/147 (85.7%)
# Gaps:           0/147 ( 0.0%)
# Score: 594.0
# 
#
#=======================================

BSNT_00260___      1 MAEVLSFMDVKRQKDFELEKNLLKELSLRQIIQSVKDCLEPLFPFLHDER     50
                     |||||||.||||||||||||:|||||||.|||||||.||.||||||.||.
RBAM_001780__      1 MAEVLSFSDVKRQKDFELEKSLLKELSLTQIIQSVKACLTPLFPFLQDEN     50

BSNT_00260___     51 DIITEGCIDFAIEAYLLGGRFGIFGYYGESMQSISARSAREEEELRMEFF    100
                     .|::||||||||||||||||||:|||||||:|..:||||.|||||.::||
RBAM_001780__     51 GILSEGCIDFAIEAYLLGGRFGVFGYYGESLQRANARSAEEEEELTVDFF    100

BSNT_00260___    101 DYLYNWIHEQYATFDKNTVYEAARKFIKDWWTAGFVQREKQCKLRMR    147
                     :||.||.||||::..:..:|||:.:||..|||.||:|||||||||||
RBAM_001780__    101 EYLCNWTHEQYSSVKQKEIYEASCRFINSWWTEGFLQREKQCKLRMR    147


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