Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00260 and RBAM_001780

See Amino acid alignment / Visit BSNT_00260 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence dna-align/BSNT_00260___ybaK.1.9828.seq
#    -bsequence dna-align/RBAM_001780___ybaK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00260___ybaK-RBAM_001780___ybaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00260___ybaK-RBAM_001780___ybaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00260___ybaK
# 2: RBAM_001780___ybaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity:     322/453 (71.1%)
# Similarity:   322/453 (71.1%)
# Gaps:          18/453 ( 4.0%)
# Score: 1063.5
# 
#
#=======================================

BSNT_00260___      1 ATGGCAGAAGTACTGTCTTTTATGGATGTGAAACGCCAAAAGGATTTTGA     50
                     ||||||||||||.|.||||||...||.||||||||.||.|||||||||||
RBAM_001780__      1 ATGGCAGAAGTATTATCTTTTTCAGACGTGAAACGGCAGAAGGATTTTGA     50

BSNT_00260___     51 ATTAGAAAAGAACTTGCTCAAAGAACTCTCTCTGAGACAAATTATCCAGT    100
                     ..|.||.||||..||.||.||.||.||.||.||||..||.||.||.||||
RBAM_001780__     51 GCTTGAGAAGAGTTTACTAAAGGAGCTGTCACTGACGCAGATCATTCAGT    100

BSNT_00260___    101 CTGTTAAGGATTGT-TTAGAACCATTATTTCCATTTTTACATGATGAACG    149
                     |.||.||.|..||| ||| ..||.||.|||||.|||.|.||.||.|||..
RBAM_001780__    101 CCGTAAAAGCATGTCTTA-CCCCTTTGTTTCCCTTTCTTCAAGACGAAAA    149

BSNT_00260___    150 AGATATTATTACCGAAGGCTGTATTGATTTTGCTATAGAAGCCTATTTGT    199
                     .|..|||.|.|..|||||.||.||.||||||||.||.|||||.|||||.|
RBAM_001780__    150 CGGCATTCTGAGTGAAGGATGCATAGATTTTGCAATTGAAGCGTATTTAT    199

BSNT_00260___    200 TAGGCGGGCGTTTTGGGATATTCGGCTATTACGGAGAATCCATGCAGAGT    249
                     |||||||.||.||.||..|.||.||||||||.||.||.||..|||||||.
RBAM_001780__    200 TAGGCGGCCGGTTCGGCGTCTTTGGCTATTATGGTGAGTCTTTGCAGAGG    249

BSNT_00260___    250 ATCAGTGCCCGCTCTGCAAGAGAAGAAGAAGAGCT-ACGTATGGAGTTTT    298
                     ...|..|||||.||.||...||||||.|||||.|| ||| .|.||.||||
RBAM_001780__    250 GCAAACGCCCGTTCGGCTGAAGAAGAGGAAGAACTGACG-GTCGATTTTT    298

BSNT_00260___    299 TTGATTATCTCTATAATTGGATACACGAGCAATA------CGCAACATTT    342
                     ||||.|||||.|..|||||||..||.||||||||      ||     ||.
RBAM_001780__    299 TTGAATATCTTTGCAATTGGACGCATGAGCAATATTCTTCCG-----TTA    343

BSNT_00260___    343 GATAAAAACACGGTTTATGAAGCGGCACGCAAGTTCATTAA-AGATTGGT    391
                     .|.|||||.| ..|.|||||||||.|..||..|||.||.|| || .||||
RBAM_001780__    344 AACAAAAAGA-AATCTATGAAGCGTCCTGCCGGTTTATCAACAG-CTGGT    391

BSNT_00260___    392 GGACAGCAGGGTTTGTTCAAAGAGAAAAACAGTGTAAGCTTCGCATGCGG    441
                     ||||.|.|||.|||.|.||||||||||||||.||||||||.||||||.||
RBAM_001780__    392 GGACGGAAGGATTTCTGCAAAGAGAAAAACAATGTAAGCTCCGCATGAGG    441

BSNT_00260___    442 TAA    444
                     |||
RBAM_001780__    442 TAA    444


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