Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00253 and RBAM_001730

See DNA alignment / Visit BSNT_00253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00253___truA.1.9828.seq
#    -bsequence pep-align/RBAM_001730___truA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00253___truA-RBAM_001730___truA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00253___truA-RBAM_001730___truA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00253___truA
# 2: RBAM_001730___truA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     215/247 (87.0%)
# Similarity:   231/247 (93.5%)
# Gaps:           0/247 ( 0.0%)
# Score: 1167.0
# 
#
#=======================================

BSNT_00253___      1 MRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKSKDRIPVVSSG     50
                     ||:||||:|||||||||||||||||||.||||||||:||:..|:||.|||
RBAM_001730__      1 MRVKCTIAYDGHLFNGYQVQPGKRTVQSELEKALAVIHKTDGRVPVYSSG     50

BSNT_00253___     51 RTDSGVHAAGQVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGF    100
                     ||||.|||||||||||||||||.|:||:|||||||||||||.||||||||
RBAM_001730__     51 RTDSDVHAAGQVIHFDTPLSIPGEKWPFALNALLPDDIAVKTAEIADDGF    100

BSNT_00253___    101 HARFSAVKKEYRYFVYTEKHPDVFKRHYAYHFSYRLNVQDMREAAKHLIG    150
                     |||||||:||||||||||||||||||||||||:|.||||.||||::||:|
RBAM_001730__    101 HARFSAVQKEYRYFVYTEKHPDVFKRHYAYHFAYPLNVQKMREASRHLVG    150

BSNT_00253___    151 THDFTSFCAAKTEVQDKVRTIYELDWTETADGLQMRITGSGFLYNMVRII    200
                     ||||||||||.|.||||||||||||||||.|||||||||:||||||||||
RBAM_001730__    151 THDFTSFCAADTAVQDKVRTIYELDWTETVDGLQMRITGNGFLYNMVRII    200

BSNT_00253___    201 AGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYLWNVYYDN    247
                     ||||||.|.||.|||:||:||||||||||||||||||||||:|.|||
RBAM_001730__    201 AGTLLDTGAGKFSPDDVKAMLEAKDREAAGRTAPGHGLYLWSVCYDN    247


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