Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00253 and RBAM_001730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence dna-align/BSNT_00253___truA.1.9828.seq
# -bsequence dna-align/RBAM_001730___truA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00253___truA-RBAM_001730___truA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00253___truA-RBAM_001730___truA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00253___truA
# 2: RBAM_001730___truA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 747
# Identity: 612/747 (81.9%)
# Similarity: 612/747 (81.9%)
# Gaps: 6/747 ( 0.8%)
# Score: 2503.0
#
#
#=======================================
BSNT_00253___ 1 ATGAGACTGAAATGCACGATTTCTTATGACGGACATTTGTTTAACGGTTA 50
||||||.|||||||.||.|||.||||||||||.|||||.||||||||.||
RBAM_001730__ 1 ATGAGAGTGAAATGTACCATTGCTTATGACGGGCATTTATTTAACGGATA 50
BSNT_00253___ 51 TCAGGTTCAGCCGGGCAAAAGAACGGTTCAGGATGAACTGGAGAAGGCTT 100
||||||.|||||.||.||..|.||.|||||...||||.||||.||.||..
RBAM_001730__ 51 TCAGGTCCAGCCTGGAAAGCGGACCGTTCAAAGTGAATTGGAAAAAGCGC 100
BSNT_00253___ 101 TGGCTGTCCTGCATAAGTCAAAAGACAGAATTCCGGTCGTT--TCGTCTG 148
||||||||.|.|||||..|..|.|.||||.|.||.|| || ||.||.|
RBAM_001730__ 101 TGGCTGTCATCCATAAAACGGACGGCAGAGTGCCTGT--TTACTCATCCG 148
BSNT_00253___ 149 GAAGAACAGACAGCGGGGTTCACGCAGCCGGACAGGTGATTCATTTTGAC 198
|..|.||.|||||||..|||||.||.|||||.|||||.|||||||||||.
RBAM_001730__ 149 GCCGCACGGACAGCGATGTTCATGCTGCCGGGCAGGTCATTCATTTTGAT 198
BSNT_00253___ 199 ACTCCACTGTCTATCCCGGCTGAGAGATGGCCATATGCCTTAAATGCACT 248
||.||.|||||.|||||||.|||||.||||||.|.|||..|.|||||.||
RBAM_001730__ 199 ACGCCGCTGTCCATCCCGGGTGAGAAATGGCCGTTTGCGCTCAATGCCCT 248
BSNT_00253___ 249 GCTTCCGGACGATATCGCAGTC-AAACAGGCAGAAATTGCGGATGATGGG 297
|||.||.||.|||||.||.||| ||||| |||||.|||||||||||||||
RBAM_001730__ 249 GCTGCCTGATGATATTGCCGTCAAAACA-GCAGAGATTGCGGATGATGGG 297
BSNT_00253___ 298 TTCCATGCACGATTTAGCGCAGTCAAAAAAGAATATCGCTACTTTGTATA 347
||||||||||||||||||||.|||.||||.||||||||||||||||||||
RBAM_001730__ 298 TTCCATGCACGATTTAGCGCGGTCCAAAAGGAATATCGCTACTTTGTATA 347
BSNT_00253___ 348 CACGGAGAAACACCCGGACGTATTTAAACGGCATTACGCTTACCATTTTT 397
.|||||||||||||||||||||||||||||.||||||||||||||||||.
RBAM_001730__ 348 TACGGAGAAACACCCGGACGTATTTAAACGACATTACGCTTACCATTTTG 397
BSNT_00253___ 398 CATATCGCCTTAATGTGCAGGACATGAGAGAAGCGGCAAAGCATCTTATA 447
||||||..||||||||||||.|.|||||.|||||..|||.|||.||..|.
RBAM_001730__ 398 CATATCCGCTTAATGTGCAGAAAATGAGGGAAGCTTCAAGGCACCTCGTC 447
BSNT_00253___ 448 GGGACACATGATTTTACGAGCTTTTGCGCGGCTAAAACAGAAGTGCAGGA 497
||||||||||||||.||.|||||||||||||||.|.||.|..||.|||||
RBAM_001730__ 448 GGGACACATGATTTCACAAGCTTTTGCGCGGCTGATACCGCGGTTCAGGA 497
BSNT_00253___ 498 CAAGGTAAGAACGATATACGAACTTGATTGGACTGAGACGGCTGACGGCC 547
.||.||.||||||||.|||||.||.||||||||||||||.|..|||||||
RBAM_001730__ 498 TAAAGTCAGAACGATTTACGAGCTGGATTGGACTGAGACCGTAGACGGCC 547
BSNT_00253___ 548 TGCAAATGCGGATCACAGGCAGCGGTTTCTTATATAATATGGTCAGAATT 597
||||.|||||||||||.||.|.||||||..|.|||||||||||||||||.
RBAM_001730__ 548 TGCAGATGCGGATCACCGGTAACGGTTTTCTCTATAATATGGTCAGAATC 597
BSNT_00253___ 598 ATTGCGGGTACTTTGCTTGATGCAGGTATTGGAAAAATTTCTCCCGATGA 647
|||||.||.||.||..|.|||.||||...|||||||.|||||||||||||
RBAM_001730__ 598 ATTGCCGGAACGTTATTGGATACAGGAGCTGGAAAATTTTCTCCCGATGA 647
BSNT_00253___ 648 GGTGAAATCCATGCTGGAAGCGAAGGATCGCGAAGCGGCAGGGCGCACAG 697
.||.|||.|.|||||.||||||||||||||||||||.||.||||||||.|
RBAM_001730__ 648 TGTAAAAGCAATGCTCGAAGCGAAGGATCGCGAAGCCGCGGGGCGCACCG 697
BSNT_00253___ 698 CGCCGGGGCACGGGCTATATTTATGGAACGTTTACTATGACAACTAA 744
|.||||||||||||||.||||||||||.|||||.|||||||||||||
RBAM_001730__ 698 CACCGGGGCACGGGCTGTATTTATGGAGCGTTTGCTATGACAACTAA 744
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