Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00252 and RBAM_001720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence pep-align/BSNT_00252___ybaF.1.9828.seq
# -bsequence pep-align/RBAM_001720___ybaF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00252___ybaF-RBAM_001720___ybaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00252___ybaF-RBAM_001720___ybaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00252___ybaF
# 2: RBAM_001720___ybaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity: 234/265 (88.3%)
# Similarity: 254/265 (95.8%)
# Gaps: 0/265 ( 0.0%)
# Score: 1221.0
#
#
#=======================================
BSNT_00252___ 1 MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQTYALLGL 50
|||||||||||||:||:|||||||||::||||||||||||||||||||||
RBAM_001720__ 1 MMDSMIIGKYVPGSSLIHRLDPRTKLVSIFLFVCIVFLANNVQTYALLGL 50
BSNT_00252___ 51 FTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFF 100
||.||::|||||||||:||||||||||.|||||||.|||||.:|||:|:|
RBAM_001720__ 51 FTFGVIALTRVPFSFLLKGLKPIIWIVAFTFLLHIFMTHEGSVIFQLGWF 100
BSNT_00252___ 101 KVYEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKL 150
|||||||:|||||||||||||.:||||||||||||||||:||||||.||:
RBAM_001720__ 101 KVYEGGLIQGIFISLRFVYLIFMTTLLTLTTTPIEITDGLEQLLNPFKKV 150
BSNT_00252___ 151 KLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKA 200
||||||||||||||||||||||||||||||||||||.||||||||:|:||
RBAM_001720__ 151 KLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGADFTSGPVKDRIKA 200
BSNT_00252___ 201 IVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTSVI 250
:||||||||||||||||||||||||||||||||||||||||||||||..|
RBAM_001720__ 201 VVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTGAI 250
BSNT_00252___ 251 VSLIVLAALLFFLRA 265
:.:||||.||||||:
RBAM_001720__ 251 LLIIVLAVLLFFLRS 265
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