Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00248 and RBAM_001680

See DNA alignment / Visit BSNT_00248 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00248___rpoA.1.9828.seq
#    -bsequence pep-align/RBAM_001680___rpoA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00248___rpoA-RBAM_001680___rpoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00248___rpoA-RBAM_001680___rpoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00248___rpoA
# 2: RBAM_001680___rpoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     311/314 (99.0%)
# Similarity:   314/314 (100.0%)
# Gaps:           0/314 ( 0.0%)
# Score: 1561.0
# 
#
#=======================================

BSNT_00248___      1 MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001680__      1 MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPG     50

BSNT_00248___     51 AAVTSIQIDGVLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEID    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001680__     51 AAVTSIQIDGVLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEID    100

BSNT_00248___    101 VQGEGTVTAADITHDSDVEILNPDLHIATLGENASFRVRLTAQRGRGYTP    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001680__    101 VQGEGTVTAADITHDSDVEILNPDLHIATLGENASFRVRLTAQRGRGYTP    150

BSNT_00248___    151 ADANKRDDQPIGVIPIDSIYTPVSRVSYQVENTRVGQVANYDKLTLDVWT    200
                     ||:||||||||||||||||:|||||:||||||||||||||||||||||||
RBAM_001680__    151 ADSNKRDDQPIGVIPIDSIFTPVSRLSYQVENTRVGQVANYDKLTLDVWT    200

BSNT_00248___    201 DGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEKEEDQKEKVLE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001680__    201 DGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEKEEDQKEKVLE    250

BSNT_00248___    251 MTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001680__    251 MTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK    300

BSNT_00248___    301 AKLEELGLGLRKDD    314
                     ||||||||||||||
RBAM_001680__    301 AKLEELGLGLRKDD    314


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