Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00246 and RBAM_001660

See DNA alignment / Visit BSNT_00246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00246___rpsM.1.9828.seq
#    -bsequence pep-align/RBAM_001660___rpsM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00246___rpsM-RBAM_001660___rpsM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00246___rpsM-RBAM_001660___rpsM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00246___rpsM
# 2: RBAM_001660___rpsM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:     119/121 (98.3%)
# Similarity:   121/121 (100.0%)
# Gaps:           0/121 ( 0.0%)
# Score: 598.0
# 
#
#=======================================

BSNT_00246___      1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTE     50
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
RBAM_001660__      1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTE     50

BSNT_00246___     51 EELGKIRDIIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQ    100
                     ||||||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_001660__     51 EELGKIRDVIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQ    100

BSNT_00246___    101 NSKNNARTRKGPRRTVANKKK    121
                     |||||||||||||||||||||
RBAM_001660__    101 NSKNNARTRKGPRRTVANKKK    121


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.