Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00246 and RBAM_001660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_00246___rpsM.1.9828.seq
# -bsequence dna-align/RBAM_001660___rpsM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00246___rpsM-RBAM_001660___rpsM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00246___rpsM-RBAM_001660___rpsM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00246___rpsM
# 2: RBAM_001660___rpsM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 351/366 (95.9%)
# Similarity: 351/366 (95.9%)
# Gaps: 0/366 ( 0.0%)
# Score: 1695.0
#
#
#=======================================
BSNT_00246___ 1 ATGGCTCGTATTGCTGGTGTAGATATCCCACGTGACAAACGTGTTGTTAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001660__ 1 ATGGCTCGTATTGCTGGTGTAGATATCCCACGTGACAAACGTGTTGTTAT 50
BSNT_00246___ 51 TTCTTTAACATACATCTTCGGAATTGGCCGCACAACGGCTCAGCAAGTTT 100
||||||||||||..||||||||||||||||||||||||||||||||||.|
RBAM_001660__ 51 TTCTTTAACATATGTCTTCGGAATTGGCCGCACAACGGCTCAGCAAGTCT 100
BSNT_00246___ 101 TAAAAGAAGCTGGAGTTTCAGAAGATACTCGTGTGCGCGATCTTACTGAA 150
|.|||||.|||||.|||||.|||||||||||||||||.||||||||||||
RBAM_001660__ 101 TGAAAGAGGCTGGTGTTTCTGAAGATACTCGTGTGCGTGATCTTACTGAA 150
BSNT_00246___ 151 GAAGAACTTGGTAAAATCCGTGATATTATTGACAAACTGAAAGTAGAAGG 200
||||||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_001660__ 151 GAAGAACTTGGTAAAATCCGTGATGTTATTGACAAACTGAAAGTAGAAGG 200
BSNT_00246___ 201 TGACCTTCGCCGTGAAGTTTCTCTTAATATCAAACGTCTGATCGAAATCG 250
|||||||||||||||||||||||||||.|||||.||||||||||||||||
RBAM_001660__ 201 TGACCTTCGCCGTGAAGTTTCTCTTAACATCAAGCGTCTGATCGAAATCG 250
BSNT_00246___ 251 GAAGCTACCGCGGAATCCGTCATCGCAGAGGATTACCTGTTCGCGGACAA 300
|||||||||||||||||||.|||||||||||.||.|||||||||||||||
RBAM_001660__ 251 GAAGCTACCGCGGAATCCGCCATCGCAGAGGTTTGCCTGTTCGCGGACAA 300
BSNT_00246___ 301 AACTCTAAAAACAACGCGCGTACTCGTAAAGGTCCGCGTCGTACTGTAGC 350
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_001660__ 301 AACTCTAAAAACAATGCGCGTACTCGTAAAGGTCCGCGTCGTACTGTAGC 350
BSNT_00246___ 351 TAACAAGAAAAAATAA 366
||||||||||||||||
RBAM_001660__ 351 TAACAAGAAAAAATAA 366
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