Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00239 and RBAM_001600

See DNA alignment / Visit BSNT_00239 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00239___rplO.1.9828.seq
#    -bsequence pep-align/RBAM_001600___rplO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00239___rplO-RBAM_001600___rplO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00239___rplO-RBAM_001600___rplO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00239___rplO
# 2: RBAM_001600___rplO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     142/146 (97.3%)
# Similarity:   145/146 (99.3%)
# Gaps:           0/146 ( 0.0%)
# Score: 729.0
# 
#
#=======================================

BSNT_00239___      1 MKLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGF     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_001600__      1 MKLHELKPSEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGF     50

BSNT_00239___     51 EGGQMPLFQRLPKRGFTNINRKEYAVVNLDKLNGFAEGTEVTPELLLETG    100
                     ||||||||||||||||||||||:||:||:|||||||||||||||||||||
RBAM_001600__     51 EGGQMPLFQRLPKRGFTNINRKDYAIVNVDKLNGFAEGTEVTPELLLETG    100

BSNT_00239___    101 VISKLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI    146
                     ||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001600__    101 VISKLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI    146


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