Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00239 and RBAM_001600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_00239___rplO.1.9828.seq
# -bsequence dna-align/RBAM_001600___rplO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00239___rplO-RBAM_001600___rplO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00239___rplO-RBAM_001600___rplO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00239___rplO
# 2: RBAM_001600___rplO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 426/443 (96.2%)
# Similarity: 426/443 (96.2%)
# Gaps: 4/443 ( 0.9%)
# Score: 2057.0
#
#
#=======================================
BSNT_00239___ 1 ATGAAACTTCATGAATTAAAACCTTCAGAAGGTTCACGCAAA--ACGCGT 48
||||||||||||||||||||.|||||||||||||||||.||| ||||
RBAM_001600__ 1 ATGAAACTTCATGAATTAAAGCCTTCAGAAGGTTCACGTAAAGTACGC-- 48
BSNT_00239___ 49 AATCGCGTAGGTCGTGGTATTGGTTCTGGCAACGGTAAAACAGCTGGTAA 98
|||||||||||||||||||||||||||||.||||||||||||||||||||
RBAM_001600__ 49 AATCGCGTAGGTCGTGGTATTGGTTCTGGTAACGGTAAAACAGCTGGTAA 98
BSNT_00239___ 99 AGGTCACAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGCCCTGGAT 148
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001600__ 99 AGGTCACAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGCCCTGGAT 148
BSNT_00239___ 149 TCGAGGGGGGACAAATGCCTTTATTCCAACGTCTTCCTAAACGCGGTTTC 198
|||||||||||||||||||||||||||||||||||||||||||||||||.
RBAM_001600__ 149 TCGAGGGGGGACAAATGCCTTTATTCCAACGTCTTCCTAAACGCGGTTTT 198
BSNT_00239___ 199 ACTAACATCAACCGCAAGGAATACGCTGTAGTCAACCTAGACAAATTGAA 248
||.|||||||||||.|||||.||||||.|.||.|||.|||||||||||||
RBAM_001600__ 199 ACAAACATCAACCGTAAGGATTACGCTATTGTGAACGTAGACAAATTGAA 248
BSNT_00239___ 249 CGGTTTTGCAGAAGGAACGGAAGTCACTCCTGAACTTCTTCTAGAGACTG 298
|||||||||.||||||||||||||||||||||||||||||||.|||||||
RBAM_001600__ 249 CGGTTTTGCGGAAGGAACGGAAGTCACTCCTGAACTTCTTCTTGAGACTG 298
BSNT_00239___ 299 GTGTTATTAGCAAACTTAATGCAGGAGTAAAGATTCTTGGCAACGGTAAA 348
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001600__ 299 GTGTTATTAGCAAACTTAATGCAGGAGTAAAGATTCTTGGCAACGGTAAA 348
BSNT_00239___ 349 TTAGAGAAAAAATTAACTGTAAAAGCCAATAAATTCTCTGCTTCTGCGAA 398
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001600__ 349 TTAGAGAAAAAATTAACTGTAAAAGCCAATAAATTCTCTGCTTCTGCGAA 398
BSNT_00239___ 399 AGAAGCTGTTGAAGCTGCTGGCGGTACAGCTGAGGTGATCTAA 441
|||||||||||||||||||||||||||||||||||||||||||
RBAM_001600__ 399 AGAAGCTGTTGAAGCTGCTGGCGGTACAGCTGAGGTGATCTAA 441
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