Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00231 and RBAM_001520

See DNA alignment / Visit BSNT_00231 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00231___rplX.1.9828.seq
#    -bsequence pep-align/RBAM_001520___rplX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00231___rplX-RBAM_001520___rplX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00231___rplX-RBAM_001520___rplX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00231___rplX
# 2: RBAM_001520___rplX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 103
# Identity:     103/103 (100.0%)
# Similarity:   103/103 (100.0%)
# Gaps:           0/103 ( 0.0%)
# Score: 527.0
# 
#
#=======================================

BSNT_00231___      1 MHVKKGDKVMVISGKDKGKQGTILAAFPKKDRVLVEGVNMVKKHSKPTQA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001520__      1 MHVKKGDKVMVISGKDKGKQGTILAAFPKKDRVLVEGVNMVKKHSKPTQA     50

BSNT_00231___     51 NPQGGISNQEAPIHVSNVMPLDPKTGEVTRVGYKVEDGKKVRVAKKSGQV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001520__     51 NPQGGISNQEAPIHVSNVMPLDPKTGEVTRVGYKVEDGKKVRVAKKSGQV    100

BSNT_00231___    101 LDK    103
                     |||
RBAM_001520__    101 LDK    103


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