Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00225 and RBAM_001460

See DNA alignment / Visit BSNT_00225 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00225___rplV.1.9828.seq
#    -bsequence pep-align/RBAM_001460___rplV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00225___rplV-RBAM_001460___rplV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00225___rplV-RBAM_001460___rplV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00225___rplV
# 2: RBAM_001460___rplV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:     113/113 (100.0%)
# Similarity:   113/113 (100.0%)
# Gaps:           0/113 ( 0.0%)
# Score: 550.0
# 
#
#=======================================

BSNT_00225___      1 MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAASPIIEKV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001460__      1 MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAASPIIEKV     50

BSNT_00225___     51 LKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKRT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001460__     51 LKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKRT    100

BSNT_00225___    101 SHITIVVSEKKEG    113
                     |||||||||||||
RBAM_001460__    101 SHITIVVSEKKEG    113


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