Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00221 and RBAM_001420
See
DNA alignment /
Visit
BSNT_00221 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence pep-align/BSNT_00221___rplD.1.9828.seq
# -bsequence pep-align/RBAM_001420___rplD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00221___rplD-RBAM_001420___rplD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00221___rplD-RBAM_001420___rplD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00221___rplD
# 2: RBAM_001420___rplD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 202/207 (97.6%)
# Similarity: 205/207 (99.0%)
# Gaps: 0/207 ( 0.0%)
# Score: 1004.0
#
#
#=======================================
BSNT_00221___ 1 MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHK 50
|||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_001420__ 1 MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGSHK 50
BSNT_00221___ 51 VKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYK 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001420__ 51 VKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYK 100
BSNT_00221___ 101 LPKKVRRLAIKSVLSSKVIDNNIIVLEDLTLDTAKTKEMAAILKGLSVEK 150
||||||||||||||||||.||||||||||||||.||||||||||||||||
RBAM_001420__ 101 LPKKVRRLAIKSVLSSKVNDNNIIVLEDLTLDTVKTKEMAAILKGLSVEK 150
BSNT_00221___ 151 KALIVTADANEAVALSARNIPGVTVVEANGINVLDVVNHEKLLITKAAVE 200
|||||||||||||:||||||||||||:|||||||||||||||||||||||
RBAM_001420__ 151 KALIVTADANEAVSLSARNIPGVTVVQANGINVLDVVNHEKLLITKAAVE 200
BSNT_00221___ 201 KVEEVLA 207
|||||||
RBAM_001420__ 201 KVEEVLA 207
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.