Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00221 and RBAM_001420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_00221___rplD.1.9828.seq
# -bsequence dna-align/RBAM_001420___rplD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00221___rplD-RBAM_001420___rplD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00221___rplD-RBAM_001420___rplD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00221___rplD
# 2: RBAM_001420___rplD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 624
# Identity: 594/624 (95.2%)
# Similarity: 594/624 (95.2%)
# Gaps: 0/624 ( 0.0%)
# Score: 2850.0
#
#
#=======================================
BSNT_00221___ 1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGACAT 50
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_001420__ 1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGATAT 50
BSNT_00221___ 51 CGAATTAAACGCTTCTGTATTTGGTATCGAACCAAATGAGAGTGTTGTAT 100
||||||||||||.|||||||||||.||.||.|||||||||||.||.||||
RBAM_001420__ 51 CGAATTAAACGCGTCTGTATTTGGAATTGAGCCAAATGAGAGCGTAGTAT 100
BSNT_00221___ 101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGAACTCACAAA 150
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_001420__ 101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGATCTCACAAA 150
BSNT_00221___ 151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGTAAACCATGGCGTCA 200
|||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_001420__ 151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGCAAACCATGGCGTCA 200
BSNT_00221___ 201 AAAAGGTACTGGACGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC 250
|||||||||.||.|||||||||||||||||||||||||||||||||||||
RBAM_001420__ 201 AAAAGGTACAGGTCGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC 250
BSNT_00221___ 251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTATAAA 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_001420__ 251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTACAAA 300
BSNT_00221___ 301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001420__ 301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA 350
BSNT_00221___ 351 AGTGATCGACAACAATATCATCGTTCTTGAAGATCTTACTCTTGATACGG 400
|||||.|||||||||.||.||.||||||||||||||||||||||||||||
RBAM_001420__ 351 AGTGAACGACAACAACATTATTGTTCTTGAAGATCTTACTCTTGATACGG 400
BSNT_00221___ 401 CTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGGTTATCTGTTGAGAAA 450
.|||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_001420__ 401 TTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGATTATCTGTTGAGAAA 450
BSNT_00221___ 451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTAGCATTATCTGC 500
|||||||||||||||||||||||||||||||||||||||.|..|.|||||
RBAM_001420__ 451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTATCTCTTTCTGC 500
BSNT_00221___ 501 TCGTAACATTCCTGGAGTTACTGTTGTTGAAGCTAATGGAATCAACGTTT 550
.||.|||||.|||||||||||.||||||.|||||||.|||||||||||.|
RBAM_001420__ 501 ACGCAACATCCCTGGAGTTACAGTTGTTCAAGCTAACGGAATCAACGTGT 550
BSNT_00221___ 551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCAGCGGTTGAA 600
||||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_001420__ 551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCTGCGGTTGAA 600
BSNT_00221___ 601 AAAGTAGAGGAGGTGCTTGCATAA 624
||||||||||||||||||||||||
RBAM_001420__ 601 AAAGTAGAGGAGGTGCTTGCATAA 624
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