Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00220 and RBAM_001410

See DNA alignment / Visit BSNT_00220 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00220___rplC.1.9828.seq
#    -bsequence pep-align/RBAM_001410___rplC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00220___rplC-RBAM_001410___rplC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00220___rplC-RBAM_001410___rplC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00220___rplC
# 2: RBAM_001410___rplC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity:     204/209 (97.6%)
# Similarity:   209/209 (100.0%)
# Gaps:           0/209 ( 0.0%)
# Score: 1046.0
# 
#
#=======================================

BSNT_00220___      1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__      1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQ     50

BSNT_00220___     51 LGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVE    100
                     ||||||||||||||||||||||||||||||||||||:|||||:|||||||
RBAM_001410__     51 LGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVDMDAYEIGQEVKVE    100

BSNT_00220___    101 IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVD    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__    101 IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVD    150

BSNT_00220___    151 PNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLI    200
                     ||||||||||||||||:||||||||||||||||||||||||||||:|:||
RBAM_001410__    151 PNRVFKGKLLPGRMGGDQITVQNLEIVKVDAERNLLLIKGNVPGARKTLI    200

BSNT_00220___    201 TVKSAVKSK    209
                     |||||||||
RBAM_001410__    201 TVKSAVKSK    209


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