Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00220 and RBAM_001410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_00220___rplC.1.9828.seq
# -bsequence dna-align/RBAM_001410___rplC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00220___rplC-RBAM_001410___rplC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00220___rplC-RBAM_001410___rplC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00220___rplC
# 2: RBAM_001410___rplC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity: 598/630 (94.9%)
# Similarity: 598/630 (94.9%)
# Gaps: 0/630 ( 0.0%)
# Score: 2862.0
#
#
#=======================================
BSNT_00220___ 1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTATTCGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__ 1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTATTCGC 50
BSNT_00220___ 51 TGAGAATGGTGATCTTATTCCGGTAACTGTTATCGAGGCTGCTCCAAACG 100
.|||||.|||||||||||.||||||||||||||.||.||.||||||||||
RBAM_001410__ 51 AGAGAACGGTGATCTTATCCCGGTAACTGTTATTGAAGCAGCTCCAAACG 100
BSNT_00220___ 101 TTGTTCTTCAAAAGAAAACAGCTGAAAACGACGGTTACGAAGCAATCCAG 150
|||||||||||||||||||||||||||||||.||.||.|||||.||||||
RBAM_001410__ 101 TTGTTCTTCAAAAGAAAACAGCTGAAAACGATGGCTATGAAGCGATCCAG 150
BSNT_00220___ 151 CTTGGTTTTGACGACAAGCGTGAAAAGCTTTCTAACAAACCTGAAAAAGG 200
||||||||||||||.|||||||||||||||||.||||||||.||||||||
RBAM_001410__ 151 CTTGGTTTTGACGATAAGCGTGAAAAGCTTTCAAACAAACCGGAAAAAGG 200
BSNT_00220___ 201 GCACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAAGAATTAC 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__ 201 ACACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAAGAATTAC 250
BSNT_00220___ 251 GCGGAGTGGAAATGGATGCGTATGAAGTTGGTCAGGAAGTCAAGGTTGAA 300
||||.|||||.|||||||||||||||.|||||||||||||||||||||||
RBAM_001410__ 251 GCGGCGTGGATATGGATGCGTATGAAATTGGTCAGGAAGTCAAGGTTGAA 300
BSNT_00220___ 301 ATTTTCTCTGCTGGAGAAATCGTAGATGTAACAGGAGTATCTAAAGGTAA 350
|||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_001410__ 301 ATTTTCTCTGCAGGAGAAATCGTAGATGTAACAGGAGTATCTAAAGGTAA 350
BSNT_00220___ 351 AGGTTTCCAAGGTGCGATCAAGCGCCACGGACAATCTCGCGGACCTATGT 400
|||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_001410__ 351 AGGTTTCCAAGGTGCAATCAAGCGCCACGGACAATCTCGCGGACCTATGT 400
BSNT_00220___ 401 CTCACGGTTCACGCTACCACCGTCGTCCTGGTTCAATGGGACCTGTAGAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__ 401 CTCACGGTTCACGCTACCACCGTCGTCCTGGTTCAATGGGACCTGTAGAT 450
BSNT_00220___ 451 CCTAACCGTGTATTCAAAGGTAAATTATTACCTGGACGTATGGGCGGAGA 500
||||||||||||||||||||||||.|||||||||||||.|||||||||||
RBAM_001410__ 451 CCTAACCGTGTATTCAAAGGTAAACTATTACCTGGACGCATGGGCGGAGA 500
BSNT_00220___ 501 GCAAATCACTGTTCAAAATCTTGAAATCGTTAAAGTTGATGCAGAACGCA 550
.|||||||||||.|||||.|||||||||||.|||||.|||||.||.||||
RBAM_001410__ 501 TCAAATCACTGTCCAAAACCTTGAAATCGTAAAAGTAGATGCTGAGCGCA 550
BSNT_00220___ 551 ATCTTCTTTTGATCAAAGGTAACGTACCTGGTGCGAAGAAATCTTTAATC 600
|||||||||||||.||||||||||||||||||||||..|||.||||||||
RBAM_001410__ 551 ATCTTCTTTTGATTAAAGGTAACGTACCTGGTGCGAGAAAAACTTTAATC 600
BSNT_00220___ 601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA 630
||||||||||||||||||||||||||||||
RBAM_001410__ 601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA 630
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