Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00217 and RBAM_001390

See DNA alignment / Visit BSNT_00217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00217___ybaC.1.9828.seq
#    -bsequence pep-align/RBAM_001390___ybaC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00217___ybaC-RBAM_001390___ybaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00217___ybaC-RBAM_001390___ybaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00217___ybaC
# 2: RBAM_001390___ybaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     165/321 (51.4%)
# Similarity:   216/321 (67.3%)
# Gaps:           3/321 ( 0.9%)
# Score: 848.0
# 
#
#=======================================

BSNT_00217___      1 ---MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQI     47
                        ...:...|:::::|.|..::|.:||||.|..||||||||||||||||
RBAM_001390__      1 MNDNFKKTNRISMLQQLLINGSEQTIMINGDDRSNPLLLFLHGGPGTPQI     50

BSNT_00217___     48 GYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTIDHFIKDTIQVT     97
                     ||.|.||.:||::||||:|||||:||||||.|...|||:|....|||.:|
RBAM_001390__     51 GYARKYQNKLEKHFTVVNWDQRGAGLSYSKEIPGSSMTLDQLTADTIHLT    100

BSNT_00217___     98 QWLLAHFSKSKLYLAGHSWGSILALHVLQQCPDLFYAYYGISQVVNPHDE    147
                     :.|...||:.|:|:||:||||:|||||||:.|||:|||.|||||||...|
RBAM_001390__    101 ERLCKQFSRQKIYIAGYSWGSVLALHVLQERPDLYYAYIGISQVVNIQKE    150

BSNT_00217___    148 ESTAFQNIREISKSKKASLLSFLTRFIGAPPWKQDIQHLIYRFCVELSRG    197
                     |:.|::.:.|.|:.:|..||.....|||||||::.:|..::..|:|:..|
RBAM_001390__    151 ETEAYRLMLEWSRQRKHFLLEKTLSFIGAPPWEKQLQRSLFLLCIEMRGG    200

BSNT_00217___    198 GFTRRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTGELYRFNA    247
                     |||.....:|....:||.|..||||.......|..||.|||..:|..|:|
RBAM_001390__    201 GFTHHPIGALKAGGRMLFGEPYGVRGSFLAARGQMFSLKHLWEDLIFFDA    250

BSNT_00217___    248 FTSVPSIKVPCVFISGKHDLIVPAEISKQYYQVLEAPEKRWFQFENSAHT    297
                     ..||.||.:||.|:||::||.||...|.:|||.::||.|.|..||||||:
RBAM_001390__    251 GESVSSIIIPCCFMSGRYDLTVPGTTSFEYYQKVDAPYKEWHWFENSAHS    300

BSNT_00217___    298 PHIEEPALFANTLSRHARHHL    318
                     ||:|||..||..:||.|..||
RBAM_001390__    301 PHLEEPDRFAEVVSRFASFHL    321


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