Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00216 and RBAM_001380

See DNA alignment / Visit BSNT_00216 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00216___tuf.1.9828.seq
#    -bsequence pep-align/RBAM_001380___tufA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00216___tuf-RBAM_001380___tufA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00216___tuf-RBAM_001380___tufA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00216___tuf
# 2: RBAM_001380___tufA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity:     384/396 (97.0%)
# Similarity:   391/396 (98.7%)
# Gaps:           0/396 ( 0.0%)
# Score: 1975.0
# 
#
#=======================================

BSNT_00216___      1 MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAITTVLHKKSGKGTAMAYDQ     50
                     ||||||||||||||||||||||||||||||||:|||||||||||||||||
RBAM_001380__      1 MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAISTVLHKKSGKGTAMAYDQ     50

BSNT_00216___     51 IDGAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQM    100
                     |||||||||||||||||||||||:||||||||||||||||||||||||||
RBAM_001380__     51 IDGAPEERERGITISTAHVEYETDTRHYAHVDCPGHADYVKNMITGAAQM    100

BSNT_00216___    101 DGAILVVSAADGPMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLEL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__    101 DGAILVVSAADGPMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLEL    150

BSNT_00216___    151 VEMEVRDLLSEYDFPGDDVPVVKGSALKALEGDAEWEAKIFELMDAVDEY    200
                     |||||||||||||||||||||||||||||||||||:|.||.|||.|||||
RBAM_001380__    151 VEMEVRDLLSEYDFPGDDVPVVKGSALKALEGDAEYEEKILELMAAVDEY    200

BSNT_00216___    201 IPTPERDTEKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEIIGLQ    250
                     ||||||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_001380__    201 IPTPERDTDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEIIGLQ    250

BSNT_00216___    251 EENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLAKPGT    300
                     |||.||||||||||||||||||||||||||||||:||:||||||||||||
RBAM_001380__    251 EENSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVLAKPGT    300

BSNT_00216___    301 ITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGIIHLPEGV    350
                     ||||||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_001380__    301 ITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGIINLPEGV    350

BSNT_00216___    351 EMVMPGDNTEMNVELISTIAIEEGTRFSIREGGRTVGSGVVSTITE    396
                     |||||||||||.||||||||||||||||||||||||||||||||||
RBAM_001380__    351 EMVMPGDNTEMIVELISTIAIEEGTRFSIREGGRTVGSGVVSTITE    396


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