Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00216 and RBAM_001380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_00216___tuf.1.9828.seq
# -bsequence dna-align/RBAM_001380___tufA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00216___tuf-RBAM_001380___tufA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00216___tuf-RBAM_001380___tufA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00216___tuf
# 2: RBAM_001380___tufA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1192
# Identity: 1156/1192 (97.0%)
# Similarity: 1156/1192 (97.0%)
# Gaps: 2/1192 ( 0.2%)
# Score: 5624.0
#
#
#=======================================
BSNT_00216___ 1 ATGGCTAAAGAAAAATTCGACCGTTCCAAATCACATGCCAATATTGGTAC 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_001380__ 1 ATGGCTAAAGAAAAATTCGACCGTTCCAAATCACATGCCAATATCGGTAC 50
BSNT_00216___ 51 AATTGGACACGTTGACCATGGTAAAACAACTTTAACTGCTGCTATCACAA 100
||||||||||||||||||||||||||||||.|||||||||||||||.|||
RBAM_001380__ 51 AATTGGACACGTTGACCATGGTAAAACAACATTAACTGCTGCTATCTCAA 100
BSNT_00216___ 101 CAGTACTTCATAAGAAATCTGGTAAAGGTACAGCTATGGCGTACGATCAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 101 CAGTACTTCATAAGAAATCTGGTAAAGGTACAGCTATGGCGTACGATCAA 150
BSNT_00216___ 151 ATTGATGGTGCTCCAGAAGAACGCGAGCGTGGTATCACAATCTCTACTGC 200
|||||||||||||||||||||||.|||||.||||||||||||||||||||
RBAM_001380__ 151 ATTGATGGTGCTCCAGAAGAACGTGAGCGCGGTATCACAATCTCTACTGC 200
BSNT_00216___ 201 ACACGTTGAGTACGAAACTGAAACTCGTCACTATGCACACGTTGACTGCC 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_001380__ 201 ACACGTTGAGTACGAAACTGACACTCGTCACTATGCACACGTTGACTGCC 250
BSNT_00216___ 251 CAGGACACGCTGACTATGTTAAAAACATGATCACTGGTGCTGCGCAAATG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 251 CAGGACACGCTGACTATGTTAAAAACATGATCACTGGTGCTGCGCAAATG 300
BSNT_00216___ 301 GACGGAGCTATCCTTGTAGTATCTGCTGCTGATGGCCCAATGCCACAAAC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 301 GACGGAGCTATCCTTGTAGTATCTGCTGCTGATGGCCCAATGCCACAAAC 350
BSNT_00216___ 351 TCGTGAGCACATCCTTCTTTCTAAAAACGTTGGTGTACCATACATCGTTG 400
||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_001380__ 351 TCGTGAGCACATCCTTCTTTCTAAAAACGTTGGTGTACCATACATCGTAG 400
BSNT_00216___ 401 TATTCTTAAACAAATGCGACATGGTAGACGACGAAGAGCTTCTTGAACTA 450
|||||.|.||||||||||||||||||||||||||||||||||||||.||.
RBAM_001380__ 401 TATTCCTTAACAAATGCGACATGGTAGACGACGAAGAGCTTCTTGAGCTT 450
BSNT_00216___ 451 GTTGAAATGGAAGTTCGCGATCTTCTTAGCGAATACGACTTCCCTGGTGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 451 GTTGAAATGGAAGTTCGCGATCTTCTTAGCGAATACGACTTCCCTGGTGA 500
BSNT_00216___ 501 TGATGTACCAGTTGTTAAAGGTTCTGCTCTTAAAGCTCTTGAAGGAGACG 550
|||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_001380__ 501 TGATGTACCAGTTGTTAAAGGTTCTGCTCTTAAAGCTCTTGAAGGTGACG 550
BSNT_00216___ 551 CTGAGTGGGAAGCTAAAA-TCTTCGAACTTATGGATGCGGTTGATGAGTA 599
||||||..||||..|||| |||| ||||||||||.|||.|||||||||||
RBAM_001380__ 551 CTGAGTACGAAGAAAAAATTCTT-GAACTTATGGCTGCAGTTGATGAGTA 599
BSNT_00216___ 600 CATCCCAACTCCAGAACGCGACACTGAAAAACCATTCATGATGCCAGTTG 649
|||||||||||||||||||||||||||.||||||||||||||||||||||
RBAM_001380__ 600 CATCCCAACTCCAGAACGCGACACTGACAAACCATTCATGATGCCAGTTG 649
BSNT_00216___ 650 AGGACGTATTCTCAATCACTGGTCGTGGTACAGTTGCTACTGGCCGTGTA 699
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 650 AGGACGTATTCTCAATCACTGGTCGTGGTACAGTTGCTACTGGCCGTGTA 699
BSNT_00216___ 700 GAACGCGGACAAGTTAAAGTCGGTGACGAAGTTGAAATCATCGGTCTTCA 749
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 700 GAACGCGGACAAGTTAAAGTCGGTGACGAAGTTGAAATCATCGGTCTTCA 749
BSNT_00216___ 750 AGAAGAGAACAAGAAAACAACTGTTACAGGTGTTGAAATGTTCCGTAAGC 799
||||||.||||..|||||||||||||||||||||||||||||||||||||
RBAM_001380__ 750 AGAAGAAAACAGCAAAACAACTGTTACAGGTGTTGAAATGTTCCGTAAGC 799
BSNT_00216___ 800 TTCTTGATTACGCTGAAGCTGGTGACAACATTGGTGCCCTTCTTCGCGGT 849
|||||||.||.|||||||||||.||||||||.|||||.||||||||||||
RBAM_001380__ 800 TTCTTGACTATGCTGAAGCTGGAGACAACATCGGTGCACTTCTTCGCGGT 849
BSNT_00216___ 850 GTATCTCGTGAAGAAATCCAACGTGGTCAAGTACTTGCTAAACCAGGTAC 899
|||.||||||||||.|||||||||||.|||||||||||||||||||||||
RBAM_001380__ 850 GTAGCTCGTGAAGACATCCAACGTGGACAAGTACTTGCTAAACCAGGTAC 899
BSNT_00216___ 900 AATCACTCCACACAGCAAATTCAAAGCTGAAGTTTACGTTCTTTCTAAAG 949
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 900 AATCACTCCACACAGCAAATTCAAAGCTGAAGTTTACGTTCTTTCTAAAG 949
BSNT_00216___ 950 AAGAGGGTGGACGTCATACTCCATTCTTCTCTAACTACCGTCCTCAGTTC 999
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 950 AAGAGGGTGGACGTCATACTCCATTCTTCTCTAACTACCGTCCTCAGTTC 999
BSNT_00216___ 1000 TACTTCCGTACAACTGACGTAACTGGTATCATCCATCTTCCAGAAGGCGT 1049
|||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_001380__ 1000 TACTTCCGTACAACTGACGTAACTGGTATCATCAATCTTCCAGAAGGCGT 1049
BSNT_00216___ 1050 AGAAATGGTTATGCCTGGAGATAACACTGAAATGAACGTTGAACTTATTT 1099
|||||||||||||||||||||||||||||||||||.||||||||||||.|
RBAM_001380__ 1050 AGAAATGGTTATGCCTGGAGATAACACTGAAATGATCGTTGAACTTATCT 1099
BSNT_00216___ 1100 CTACAATCGCTATCGAAGAAGGAACTCGTTTCTCTATTCGTGAAGGCGGA 1149
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001380__ 1100 CTACAATCGCTATCGAAGAAGGAACTCGTTTCTCTATTCGTGAAGGCGGA 1149
BSNT_00216___ 1150 CGTACTGTTGGTTCAGGCGTTGTTTCTACAATCACTGAGTAA 1191
|||||.||||||||||||||||||||||||||||||||||||
RBAM_001380__ 1150 CGTACAGTTGGTTCAGGCGTTGTTTCTACAATCACTGAGTAA 1191
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