Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00206 and RBAM_001300

See DNA alignment / Visit BSNT_00206 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence pep-align/BSNT_00206___rplL.1.9828.seq
#    -bsequence pep-align/RBAM_001300___rplL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00206___rplL-RBAM_001300___rplL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00206___rplL-RBAM_001300___rplL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00206___rplL
# 2: RBAM_001300___rplL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:     123/123 (100.0%)
# Similarity:   123/123 (100.0%)
# Gaps:           0/123 ( 0.0%)
# Score: 581.0
# 
#
#=======================================

BSNT_00206___      1 MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001300__      1 MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGA     50

BSNT_00206___     51 AEEQSEFDLILAGAGSQKIKVIKVVREITGLGLKEAKELVDNTPKPLKEG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001300__     51 AEEQSEFDLILAGAGSQKIKVIKVVREITGLGLKEAKELVDNTPKPLKEG    100

BSNT_00206___    101 IAKEEAEELKAKLEEVGASVEVK    123
                     |||||||||||||||||||||||
RBAM_001300__    101 IAKEEAEELKAKLEEVGASVEVK    123


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.