Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00206 and RBAM_001300

See Amino acid alignment / Visit BSNT_00206 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence dna-align/BSNT_00206___rplL.1.9828.seq
#    -bsequence dna-align/RBAM_001300___rplL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00206___rplL-RBAM_001300___rplL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00206___rplL-RBAM_001300___rplL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00206___rplL
# 2: RBAM_001300___rplL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity:     365/372 (98.1%)
# Similarity:   365/372 (98.1%)
# Gaps:           0/372 ( 0.0%)
# Score: 1797.0
# 
#
#=======================================

BSNT_00206___      1 ATGGCTTTAAATATCGAAGAAATCATTGCTTCCGTTAAAGAAGCAACTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001300__      1 ATGGCTTTAAATATCGAAGAAATCATTGCTTCCGTTAAAGAAGCAACTGT     50

BSNT_00206___     51 ACTTGAATTGAACGACCTAGTAAAAGCAATCGAAGAAGAATTTGGCGTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001300__     51 ACTTGAATTGAACGACCTAGTAAAAGCAATCGAAGAAGAATTTGGCGTAA    100

BSNT_00206___    101 CTGCTGCTGCTCCTGTAGCTGTAGCTGGCGGAGCTGCTGCAGGCGGAGCT    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||.|||
RBAM_001300__    101 CTGCTGCTGCTCCTGTAGCTGTAGCTGGCGGAGCTGCTGCTGGCGGCGCT    150

BSNT_00206___    151 GCTGAAGAGCAAAGCGAATTCGATCTTATCCTTGCTGGTGCAGGATCTCA    200
                     |||||||||||||||||||||||.||||||||||||||||||||.|||||
RBAM_001300__    151 GCTGAAGAGCAAAGCGAATTCGACCTTATCCTTGCTGGTGCAGGTTCTCA    200

BSNT_00206___    201 AAAAATCAAAGTTATCAAAGTTGTACGTGAAATCACTGGTCTTGGCTTGA    250
                     .|||||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_001300__    201 GAAAATCAAAGTTATCAAAGTTGTTCGTGAAATCACTGGTCTTGGCTTGA    250

BSNT_00206___    251 AAGAAGCTAAAGAACTTGTTGACAACACTCCAAAACCACTTAAAGAAGGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001300__    251 AAGAAGCTAAAGAACTTGTTGACAACACTCCAAAACCACTTAAAGAAGGT    300

BSNT_00206___    301 ATTGCTAAAGAAGAAGCTGAAGAGCTTAAAGCTAAACTTGAAGAAGTTGG    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_001300__    301 ATTGCGAAAGAAGAAGCTGAAGAGCTTAAAGCTAAACTTGAAGAAGTTGG    350

BSNT_00206___    351 CGCTTCTGTAGAAGTTAAGTAA    372
                     ||||||||||||||||||||||
RBAM_001300__    351 CGCTTCTGTAGAAGTTAAGTAA    372


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