Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00203 and RBAM_001280
See
DNA alignment /
Visit
BSNT_00203 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_00203___rplA.1.9828.seq
# -bsequence pep-align/RBAM_001280___rplA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00203___rplA-RBAM_001280___rplA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00203___rplA-RBAM_001280___rplA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00203___rplA
# 2: RBAM_001280___rplA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 224/232 (96.6%)
# Similarity: 230/232 (99.1%)
# Gaps: 0/232 ( 0.0%)
# Score: 1142.0
#
#
#=======================================
BSNT_00203___ 1 MAKKGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRLGV 50
|||||||||||||||||:|||||:|||||.||||||||||||||||||||
RBAM_001280__ 1 MAKKGKKYVEAAKLVDRAKAYDVAEAVALTKKTNTAKFDATVEVAFRLGV 50
BSNT_00203___ 51 DPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADFVGDTDY 100
|||||||||||||||||||||||||||||||||||||||||||:|||:||
RBAM_001280__ 51 DPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGDSDY 100
BSNT_00203___ 101 INKIQQGWFDFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVE 150
|.|||||||:||||||||||||||||||||||||||||||||||||||||
RBAM_001280__ 101 IAKIQQGWFEFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVE 150
BSNT_00203___ 151 KAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAK 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001280__ 151 KAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAK 200
BSNT_00203___ 201 PAAAKGVYVKNVAVTSTMGPGVKVDSSTFNVK 232
|||||||||||||||||||||||||:||||||
RBAM_001280__ 201 PAAAKGVYVKNVAVTSTMGPGVKVDASTFNVK 232
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.