Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00203 and RBAM_001280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00203___rplA.1.9828.seq
# -bsequence dna-align/RBAM_001280___rplA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00203___rplA-RBAM_001280___rplA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00203___rplA-RBAM_001280___rplA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00203___rplA
# 2: RBAM_001280___rplA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 699
# Identity: 631/699 (90.3%)
# Similarity: 631/699 (90.3%)
# Gaps: 0/699 ( 0.0%)
# Score: 2883.0
#
#
#=======================================
BSNT_00203___ 1 ATGGCTAAAAAAGGTAAAAAGTACGTTGAAGCTGCTAAGCTTGTAGACCG 50
|||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_001280__ 1 ATGGCTAAAAAAGGTAAAAAGTACGTTGAAGCTGCGAAGCTTGTAGACCG 50
BSNT_00203___ 51 TTCTAAAGCTTACGACGTCTCTGAAGCAGTAGCTCTCGTTAAAAAAACAA 100
|.|.|||||||||||||||.||||||||||.||.||...|||||||||||
RBAM_001280__ 51 TGCGAAAGCTTACGACGTCGCTGAAGCAGTGGCGCTTACTAAAAAAACAA 100
BSNT_00203___ 101 ACACAGCTAAATTCGACGCTACAGTTGAAGTGGCTTTCCGTTTAGGGGTT 150
|||||||||||||||||||||||||||||||.|||||.||||||||||||
RBAM_001280__ 101 ACACAGCTAAATTCGACGCTACAGTTGAAGTTGCTTTTCGTTTAGGGGTT 150
BSNT_00203___ 151 GACCCTCGTAAAAACGACCAGCAAATCCGTGGAGCAGTTGTGCTTCCAAA 200
|||||||||||||||||.||||||||.||.||.||||||||.|||||.||
RBAM_001280__ 151 GACCCTCGTAAAAACGATCAGCAAATTCGCGGTGCAGTTGTACTTCCTAA 200
BSNT_00203___ 201 CGGAACTGGTAAAACTCAGCGCGTTCTCGTTTTCGCAAAAGGCGAAAAAG 250
||||||||||||||||||||||||.||.||.|||||.|||||||||||||
RBAM_001280__ 201 CGGAACTGGTAAAACTCAGCGCGTGCTTGTATTCGCTAAAGGCGAAAAAG 250
BSNT_00203___ 251 CGAAAGAAGCTGAAGCTGCTGGTGCAGATTTCGTAGGCGACACTGACTAC 300
|.|||||||||||||||||.||||||||.|.|||.|||||..||||.|||
RBAM_001280__ 251 CAAAAGAAGCTGAAGCTGCCGGTGCAGACTACGTTGGCGATTCTGATTAC 300
BSNT_00203___ 301 ATCAACAAAATTCAACAAGGCTGGTTCGATTTCGATGTTATCGTAGCTAC 350
|||...|||||.||.||||||||||||||.||||||||.|||||.||.||
RBAM_001280__ 301 ATCGCGAAAATCCAGCAAGGCTGGTTCGAATTCGATGTAATCGTTGCGAC 350
BSNT_00203___ 351 ACCTGACATGATGGGTGAAGTTGGTAAAATCGGTCGTGTACTTGGACCAA 400
.||||||||||||||||||||.|||||||||||.|||||.||||||||||
RBAM_001280__ 351 TCCTGACATGATGGGTGAAGTCGGTAAAATCGGCCGTGTGCTTGGACCAA 400
BSNT_00203___ 401 AAGGTTTAATGCCAAACCCTAAAACTGGTACAGTTACTTTCGAAGTTGAA 450
|||||.|.|||||||||||||||||.||.||.|||||.||||||||.|||
RBAM_001280__ 401 AAGGTCTTATGCCAAACCCTAAAACAGGAACTGTTACATTCGAAGTGGAA 450
BSNT_00203___ 451 AAAGCGATCGGCGAAATCAAAGCTGGTAAAGTTGAATACCGCGTTGATAA 500
|||||.||||||||||||||||||||||||||.||||||||||||||.||
RBAM_001280__ 451 AAAGCAATCGGCGAAATCAAAGCTGGTAAAGTAGAATACCGCGTTGACAA 500
BSNT_00203___ 501 AGCTGGAAACATTCATGTTCCTATCGGTAAAGTTTCTTTCGAGGATGAAA 550
||||||.|||||.||||||||.|||||.||||||||||||||||||||||
RBAM_001280__ 501 AGCTGGTAACATCCATGTTCCGATCGGAAAAGTTTCTTTCGAGGATGAAA 550
BSNT_00203___ 551 AACTTGTTGAGAACTTCACAACAATGTACGATACAATCCTTAAAGCTAAA 600
||||||||||||||||||||||||||||.|||||||||||.|||||.|||
RBAM_001280__ 551 AACTTGTTGAGAACTTCACAACAATGTATGATACAATCCTGAAAGCAAAA 600
BSNT_00203___ 601 CCTGCTGCAGCTAAAGGCGTTTACGTGAAAAACGTTGCTGTAACTTCTAC 650
||.|||||.||||||||.||||||||||||||||||||.||.||||||||
RBAM_001280__ 601 CCGGCTGCGGCTAAAGGTGTTTACGTGAAAAACGTTGCCGTTACTTCTAC 650
BSNT_00203___ 651 TATGGGACCTGGTGTCAAAGTAGACTCTTCAACTTTTAACGTAAAATAA 699
||||||.||||||||||||||||||.||||.|||||.||||||||||||
RBAM_001280__ 651 TATGGGCCCTGGTGTCAAAGTAGACGCTTCTACTTTCAACGTAAAATAA 699
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